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Lce1k Gene Detail
Summary
  • Symbol
    Lce1k
  • Name
    late cornified envelope 1K
  • Synonyms
    Gm7055, Sprrl6
  • Feature Type
    protein coding gene
  • IDs
    MGI:3702534
    NCBI Gene: 631101
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92713598-92715198 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    147 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3702534
 protein coding gene Chr3:92713598-92715198 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027518
 protein coding gene Chr3:93268141-93269741 (-)
A/J MGP_AJ_G0027485
 protein coding gene Chr3:90332452-90334168 (-)
AKR/J MGP_AKRJ_G0027450
 protein coding gene Chr3:92452484-92454084 (-)
BALB/cJ MGP_BALBcJ_G0027493
 protein coding gene Chr3:90142322-90143922 (-)
C3H/HeJ MGP_C3HHeJ_G0027231
 protein coding gene Chr3:92666746-92668346 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027935
 protein coding gene Chr3:96820673-96822273 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025284
 protein coding gene Chr3:86955508-86957161 (-)
CAST/EiJ MGP_CASTEiJ_G0026678
 protein coding gene Chr3:92090308-92091933 (-)
CBA/J MGP_CBAJ_G0027207
 protein coding gene Chr3:100138129-100139729 (-)
DBA/2J MGP_DBA2J_G0027344
 protein coding gene Chr3:89659358-89660958 (-)
FVB/NJ MGP_FVBNJ_G0027312
 protein coding gene Chr3:87822377-87824000 (-)
LP/J MGP_LPJ_G0027452
 protein coding gene Chr3:94488806-94490406 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027338
 protein coding gene Chr3:106437634-106439236 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027995
 protein coding gene Chr3:92182272-92183872 (-)
PWK/PhJ MGP_PWKPhJ_G0026409
 protein coding gene Chr3:89533741-89535451 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026229
 protein coding gene Chr3:90518226-90519814 (-)
WSB/EiJ MGP_WSBEiJ_G0026761
 protein coding gene Chr3:92554322-92555924 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Lce1k
  • Find Mice (IMSR)
    5 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    710
  • Tissues
    1
  • cDNA Data
    2
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 631101 NCBI Gene Model | MGI Sequence Detail 1601 C57BL/6J ±  kb
transcript NM_001254760 RefSeq | MGI Sequence Detail 665 Not Specified  
polypeptide NP_001241689 RefSeq | MGI Sequence Detail 125 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 3
    cDNA 2
    Primer pair 1
Other
Accession IDs
less
MGI:2159435, MGI:3779660
References
more
  • Summaries
    All 17
    Developmental Gene Expression 2
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory