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BC106179 Gene Detail
Summary
  • Symbol
    BC106179
  • Name
    cDNA sequence BC106179
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3702726
    NCBI Gene: 320099
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:23040274-23044234 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 14.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    209 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3702726
 lncRNA gene Chr16:23039406-23044234 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022681
 protein coding gene Chr16:20794025-20798702 (-)
A/J MGP_AJ_G0022643
 protein coding gene Chr16:19793342-19798054 (-)
AKR/J MGP_AKRJ_G0022617
 protein coding gene Chr16:20640036-20644744 (-)
BALB/cJ MGP_BALBcJ_G0022648
 protein coding gene Chr16:19995343-20000045 (-)
C3H/HeJ MGP_C3HHeJ_G0022412
 protein coding gene Chr16:20757052-20761755 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023097
 protein coding gene Chr16:21303194-21307921 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020615
 protein coding gene Chr16:20431147-20435657 (-)
CAST/EiJ MGP_CASTEiJ_G0021941
 protein coding gene Chr16:20735845-20740499 (-)
CBA/J MGP_CBAJ_G0022383
 protein coding gene Chr16:22154762-22162606 (-)
DBA/2J MGP_DBA2J_G0022515
 protein coding gene Chr16:19750268-19755325 (-)
FVB/NJ MGP_FVBNJ_G0022491
 protein coding gene Chr16:19748097-19752804 (-)
LP/J MGP_LPJ_G0022583
 protein coding gene Chr16:20585008-20589789 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022510
 protein coding gene Chr16:21691226-21696635 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023109
 protein coding gene Chr16:20590007-20595415 (-)
PWK/PhJ MGP_PWKPhJ_G0021680
 protein coding gene Chr16:20023375-20028193 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021511
 protein coding gene Chr16:20319601-20324246 (-)
WSB/EiJ MGP_WSBEiJ_G0021985
 protein coding gene Chr16:20540975-20545638 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 320099 NCBI Gene Model | MGI Sequence Detail 3961 C57BL/6J ±  kb
transcript NR_152126 RefSeq | MGI Sequence Detail 2649 C57BL/6  
polypeptide Q8C9L1 UniProt | EBI | MGI Sequence Detail 186 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 11
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory