Gm14494 Pseudogene Detail

Summary

• Symbol
  Gm14494
• Name
  predicted gene 14494
• Synonyms
  ENSMUSG00000060714

• Feature Type
  pseudogene
• IDs
  MGI:3704210
  NCBI Gene: 100043869
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr2:153668091-153668525 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 75.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704210	pseudogene	Chr2:153667974-153668998 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014569	pseudogene	ChrX:81883870-81884276 (-)
A/J	MGP_AJ_G0014581	pseudogene	ChrX:81983849-81984321 (-)
AKR/J	MGP_AKRJ_G0014504	pseudogene	ChrX:84152849-84153277 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0014366	pseudogene	ChrX:82173879-82174307 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0012737	pseudogene	ChrX:80863606-80864025 (-)
CAST/EiJ	MGP_CASTEiJ_G0013992	pseudogene	ChrX:67139489-67139917 (-)
CBA/J	MGP_CBAJ_G0014351	pseudogene	ChrX:86678035-86678463 (-)
DBA/2J	MGP_DBA2J_G0014431	pseudogene	ChrX:81369234-81369662 (-)
FVB/NJ	MGP_FVBNJ_G0014420	pseudogene	ChrX:80782817-80783245 (-)
LP/J	MGP_LPJ_G0014529	pseudogene	ChrX:82668071-82673699 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014463	pseudogene	ChrX:90166890-90167318 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012199	pseudogene	Chr2:156513860-156514293 (+)
PWK/PhJ	MGP_PWKPhJ_G0013798	pseudogene	ChrX:65170468-65171063 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010618	pseudogene	Chr16:12441838-12442265 (+)
WSB/EiJ	MGP_WSBEiJ_G0014067	pseudogene	ChrX:80499800-80500228 (-)

Homology

• Gene Tree
  Gm14494
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000083097 (Evidence)
• NCBI Gene
  100043869

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083097	Ensembl Gene Model | MGI Sequence Detail	435	C57BL/6J
transcript	ENSMUST00000118786	Ensembl | MGI Sequence Detail	435	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm14494:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20920	Chr2:153667970-153667985 (+)	-113 bp
Tssr20921	Chr2:153668001-153668006 (+)	-87 bp