B230207O21Rik Pseudogene Detail

Summary

• Symbol
  B230207O21Rik
• Name
  RIKEN cDNA B230207O21 gene

• Feature Type
  pseudogene
• IDs
  MGI:3704213
  NCBI Gene: 100049565
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:36027920-36028240 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704213	pseudogene	Chr3:36027920-36028240 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012091	pseudogene	Chr3:33729027-33729347 (+)
A/J	MGP_AJ_G0012083	pseudogene	Chr3:33101812-33102132 (+)
AKR/J	MGP_AKRJ_G0012044	pseudogene	Chr3:33700356-33700676 (+)
BALB/cJ	MGP_BALBcJ_G0012059	pseudogene	Chr3:32860243-32860563 (+)
C3H/HeJ	MGP_C3HHeJ_G0011937	pseudogene	Chr3:33774961-33775281 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012366	pseudogene	Chr3:35366178-35366498 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010801	pseudogene	Chr3:30829012-30829379 (+)
CAST/EiJ	MGP_CASTEiJ_G0011721	pseudogene	Chr3:33612447-33612768 (+)
CBA/J	MGP_CBAJ_G0011910	pseudogene	Chr3:36301808-36302128 (+)
DBA/2J	MGP_DBA2J_G0011964	pseudogene	Chr3:32576228-32576548 (+)
FVB/NJ	MGP_FVBNJ_G0011972	pseudogene	Chr3:32017935-32018256 (+)
LP/J	MGP_LPJ_G0012040	pseudogene	Chr3:34505844-34506164 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011974	pseudogene	Chr3:38761622-38761942 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012375	pseudogene	Chr3:33547876-33548196 (+)
PWK/PhJ	MGP_PWKPhJ_G0011565	pseudogene	Chr3:32223311-32223632 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011381	pseudogene	Chr3:32929606-32929929 (+)
WSB/EiJ	MGP_WSBEiJ_G0011743	pseudogene	Chr3:33577977-33578297 (+)

Homology

• Gene Tree
  B230207O21Rik
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000106096 (Evidence)
• NCBI Gene
  100049565

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106096	Ensembl Gene Model | MGI Sequence Detail	321	C57BL/6J
transcript	ENSMUST00000198634	Ensembl | MGI Sequence Detail	321	Not Applicable
polypeptide	Q3USU8	UniProt | EBI | MGI Sequence Detail	106	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 6
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;