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Hmgn2-ps Gene Detail
Summary
  • Symbol
    Hmgn2-ps
  • Name
    high mobility group nucleosomal binding domain 2, pseudogene
  • Synonyms
    Gm10282
Location &
Maps
more
  • Sequence Map
    Chr8:73057954-73059104 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 34.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704312
 protein coding gene Chr8:73057952-73059154 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036145
 protein coding gene ChrX:139361351-139362385 (-)
A/J MGP_AJ_G0036122
 protein coding gene ChrX:138758337-138759512 (-)
AKR/J MGP_AKRJ_G0036048
 protein coding gene ChrX:143172007-143174653 (-)
BALB/cJ MGP_BALBcJ_G0036113
 protein coding gene ChrX:137002449-137003653 (-)
C3H/HeJ MGP_C3HHeJ_G0035821
 protein coding gene ChrX:139480591-139481625 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035113
 protein coding gene ChrX:120197418-120198012 (-)
CBA/J MGP_CBAJ_G0035798
 protein coding gene ChrX:147842377-147843411 (-)
DBA/2J MGP_DBA2J_G0035956
 protein coding gene ChrX:137827114-137828289 (-)
FVB/NJ MGP_FVBNJ_G0035890
 protein coding gene ChrX:137057663-137058697 (-)
LP/J MGP_LPJ_G0036047
 protein coding gene ChrX:140305936-140306970 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035926
 protein coding gene ChrX:155439176-155440210 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036673
 protein coding gene ChrX:138675181-138676215 (-)
PWK/PhJ MGP_PWKPhJ_G0034806
 protein coding gene ChrX:117032732-117038482 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    HMGN2, high mobility group nucleosomal binding domain 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HMGN2, high mobility group nucleosomal binding domain 2
  • Synonyms
    HMG17
  • Links
    NCBI Gene ID: 3151
    neXtProt AC: NX_P05204
    UniProt: P05204

  • Chr Location
    1p36.11; chr1:26472440-26476642 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070713 Ensembl Gene Model | MGI Sequence Detail 1151 C57BL/6J ±  kb
transcript ENSMUST00000075602 Ensembl | MGI Sequence Detail 1151 Not Applicable  
polypeptide ENSMUSP00000075031 Ensembl | MGI Sequence Detail 90 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:6723897
References
more
  • Summaries
    All 11
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory