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Gm10638 Gene Detail
Summary
  • Symbol
    Gm10638
  • Name
    predicted gene 10638
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3704316
    NCBI Gene: 666945
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:87472327-87473688 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 42.10 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    88 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704316
 lncRNA gene Chr8:87472081-87475283 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033910
 protein coding gene Chr8:87724890-87725794 (+)
A/J MGP_AJ_G0033893
 protein coding gene Chr8:84280061-84280965 (+)
AKR/J MGP_AKRJ_G0033819
 protein coding gene Chr8:86773667-86774571 (+)
BALB/cJ MGP_BALBcJ_G0033886
 protein coding gene Chr8:84424505-84425409 (+)
C3H/HeJ MGP_C3HHeJ_G0033596
 protein coding gene Chr8:87383641-87384545 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034406
 protein coding gene Chr8:91088265-91089169 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031348
 protein coding gene Chr8:78305598-78306504 (+)
CAST/EiJ MGP_CASTEiJ_G0032927
 protein coding gene Chr8:86791866-86792770 (+)
CBA/J MGP_CBAJ_G0033572
 protein coding gene Chr8:94179889-94180793 (+)
DBA/2J MGP_DBA2J_G0033725
 protein coding gene Chr8:83893060-83893964 (+)
FVB/NJ MGP_FVBNJ_G0033672
 protein coding gene Chr8:82841956-82842884 (+)
LP/J MGP_LPJ_G0033817
 protein coding gene Chr8:87847551-87848455 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033715
 protein coding gene Chr8:96697720-96698624 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034425
 protein coding gene Chr8:86774132-86775036 (+)
PWK/PhJ MGP_PWKPhJ_G0032630
 protein coding gene Chr8:83136173-83137074 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032466
 protein coding gene Chr8:85520705-85521606 (+)
WSB/EiJ MGP_WSBEiJ_G0033038
 protein coding gene Chr8:87188902-87189806 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 666945 NCBI Gene Model | MGI Sequence Detail 1362 C57BL/6J ±  kb
transcript NR_027829 RefSeq | MGI Sequence Detail 1362 C57BL/6  
polypeptide Q3V0L6 UniProt | EBI | MGI Sequence Detail 258 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 41
    Phenotypes 32
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
  • Latest
    J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory