Gm10182 Pseudogene Detail

Summary

• Symbol
  Gm10182
• Name
  predicted pseudogene 10182

• Feature Type
  pseudogene
• IDs
  MGI:3704327
  NCBI Gene: 100041826
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:22232401-22232673 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 8.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704327	pseudogene	Chr9:22231600-22232769 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014874	pseudogene	ChrX:139361351-139362323 (-)
A/J	MGP_AJ_G0014867	pseudogene	ChrX:138758478-138759450 (-)
AKR/J	MGP_AKRJ_G0014809	pseudogene	ChrX:143172007-143174591 (-)
BALB/cJ	MGP_BALBcJ_G0014823	pseudogene	ChrX:137002590-137003591 (-)
C3H/HeJ	MGP_C3HHeJ_G0014659	pseudogene	ChrX:139480591-139481563 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014648	pseudogene	ChrX:147842377-147843349 (-)
DBA/2J	MGP_DBA2J_G0014731	pseudogene	ChrX:137827255-137828227 (-)
FVB/NJ	MGP_FVBNJ_G0014714	pseudogene	ChrX:137057663-137058635 (-)
LP/J	MGP_LPJ_G0014830	pseudogene	ChrX:140305936-140306908 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014758	pseudogene	ChrX:155439176-155440148 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015292	pseudogene	ChrX:138675181-138676153 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm10182
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000094627 (Evidence)
• NCBI Gene
  100041826

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094627	Ensembl Gene Model | MGI Sequence Detail	273	C57BL/6J
transcript	ENSMUST00000178676	Ensembl | MGI Sequence Detail	273	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm10182:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr88483	Chr9:22232769-22232771 (-)	-97 bp