Gm10177 Pseudogene Detail

Summary

• Symbol
  Gm10177
• Name
  predicted gene 10177

• Feature Type
  pseudogene
• IDs
  MGI:3704330
  NCBI Gene: 108167643
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:37164271-37164477 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 20.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704330	pseudogene	Chr9:37164211-37164637 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039768	pseudogene	ChrX:85238591-85239033 (+)
A/J	MGP_AJ_G0039767	pseudogene	ChrX:85326610-85327184 (+)
AKR/J	MGP_AKRJ_G0039692	pseudogene	ChrX:87510680-87511122 (+)
BALB/cJ	MGP_BALBcJ_G0039738	pseudogene	ChrX:84010099-84010541 (+)
C3H/HeJ	MGP_C3HHeJ_G0039395	pseudogene	ChrX:85467938-85468380 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040297	pseudogene	ChrX:87804562-87805004 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038516	pseudogene	ChrX:70376770-70377255 (+)
CBA/J	MGP_CBAJ_G0039368	pseudogene	ChrX:90248771-90249213 (+)
DBA/2J	MGP_DBA2J_G0039563	pseudogene	ChrX:84646639-84647081 (+)
FVB/NJ	MGP_FVBNJ_G0039522	pseudogene	ChrX:84047730-84048172 (+)
LP/J	MGP_LPJ_G0039604	pseudogene	ChrX:85990326-85990768 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039524	pseudogene	ChrX:94289115-94289557 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040405	pseudogene	ChrX:84881718-84882160 (+)
PWK/PhJ	MGP_PWKPhJ_G0038193	pseudogene	ChrX:68363716-68364158 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038630	pseudogene	Chr1:59714051-59714257 (-)

Homology

• Gene Tree
  Gm10177
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000090136 (Evidence)
• NCBI Gene
  108167643

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090136	Ensembl Gene Model | MGI Sequence Detail	207	C57BL/6J
transcript	ENSMUST00000161698	Ensembl | MGI Sequence Detail	207	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;