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Gm10680 Gene Detail
Summary
  • Symbol
    Gm10680
  • Name
    predicted gene 10680
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3704335
    NCBI Gene: 100048894
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:46153919-46154827 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 25.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    130 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704335
 lncRNA gene Chr9:46153919-46154827 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004624
 antisense lncRNA gene Chr9:44874003-44874899 (-)
A/J MGP_AJ_G0004605
 antisense lncRNA gene Chr9:43588626-43589534 (-)
AKR/J MGP_AKRJ_G0004588
 antisense lncRNA gene Chr9:44476666-44477574 (-)
BALB/cJ MGP_BALBcJ_G0004589
 antisense lncRNA gene Chr9:43309878-43310786 (-)
C3H/HeJ MGP_C3HHeJ_G0004538
 antisense lncRNA gene Chr9:44950613-44951521 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004739
 antisense lncRNA gene Chr9:46154403-46155311 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004190
 antisense lncRNA gene Chr9:43118847-43119754 (-)
CAST/EiJ MGP_CASTEiJ_G0004496
 antisense lncRNA gene Chr9:44812407-44813327 (-)
CBA/J MGP_CBAJ_G0004532
 antisense lncRNA gene Chr9:47838717-47839637 (-)
DBA/2J MGP_DBA2J_G0004547
 antisense lncRNA gene Chr9:43459716-43460624 (-)
FVB/NJ MGP_FVBNJ_G0004565
 antisense lncRNA gene Chr9:42723413-42724321 (-)
LP/J MGP_LPJ_G0004628
 antisense lncRNA gene Chr9:45191195-45192091 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004553
 antisense lncRNA gene Chr9:49587369-49588277 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004738
 antisense lncRNA gene Chr9:44395703-44396611 (-)
PWK/PhJ MGP_PWKPhJ_G0004449
 antisense lncRNA gene Chr9:43378796-43379704 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004389
 antisense lncRNA gene Chr9:44724238-44725134 (-)
WSB/EiJ MGP_WSBEiJ_G0004537
 antisense lncRNA gene Chr9:44444668-44445576 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074373 Ensembl Gene Model | MGI Sequence Detail 909 C57BL/6J ±  kb
transcript ENSMUST00000156612 Ensembl | MGI Sequence Detail 702 Not Applicable  
polypeptide Q3UPP7 UniProt | EBI | MGI Sequence Detail 170 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 6
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory