Gm10273 Pseudogene Detail

Summary

• Symbol
  Gm10273
• Name
  predicted pseudogene 10273

• Feature Type
  pseudogene
• IDs
  MGI:3704362
  NCBI Gene: 100039174
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:59231577-59232206 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 29.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704362	pseudogene	Chr10:59231439-59232579 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0024399	protein coding gene	Chr2:139073750-139074789 (+)
CAST/EiJ	MGP_CASTEiJ_G0033104	protein coding gene	Chr8:108375982-108376966 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0033895	protein coding gene	Chr8:120236912-120237897 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016260	protein coding gene	Chr1:6022928-6025672 (-)
PWK/PhJ	MGP_PWKPhJ_G0025516	protein coding gene	Chr2:143957146-143958192 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0025317	protein coding gene	Chr2:148169446-148170489 (+)
WSB/EiJ	MGP_WSBEiJ_G0025854	protein coding gene	Chr2:150137318-150138361 (+)

Homology

• Gene Tree
  Gm10273
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm10273
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000069622 (Evidence)
• NCBI Gene
  100039174

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000069622	Ensembl Gene Model | MGI Sequence Detail	630	C57BL/6J
transcript	ENSMUST00000092511	Ensembl | MGI Sequence Detail	630	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87