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Hdac1-ps Pseudogene Detail
Summary
  • Symbol
    Hdac1-ps
  • Name
    histone deacetylase 1, pseudogene
  • Synonyms
    EG15181, Gm10093
  • Feature Type
    pseudogene
  • IDs
    MGI:3704479
    NCBI Gene: 15181
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:78799011-78800454 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 49.28 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    171 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704479
 pseudogene Chr17:78798994-78800970 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019869
 protein coding gene Chr12:77835865-77837694 (-)
A/J MGP_AJ_G0019827
 protein coding gene Chr12:74832908-74834805 (-)
AKR/J MGP_AKRJ_G0019802
 protein coding gene Chr12:77100272-77102101 (-)
BALB/cJ MGP_BALBcJ_G0019806
 protein coding gene Chr12:75289754-75291636 (-)
C3H/HeJ MGP_C3HHeJ_G0019612
 protein coding gene Chr12:77557990-77559819 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020258
 protein coding gene Chr12:80167299-80169128 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017876
 protein coding gene Chr12:72132443-72134227 (-)
CAST/EiJ MGP_CASTEiJ_G0022334
 protein coding gene Chr16:97135084-97136969 (+)
CBA/J MGP_CBAJ_G0019582
 protein coding gene Chr12:83265440-83267269 (-)
DBA/2J MGP_DBA2J_G0019698
 protein coding gene Chr12:74696470-74698299 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0019770
 protein coding gene Chr12:77765268-77772630 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0020294
 protein coding gene Chr12:76607934-76609763 (-)
PWK/PhJ MGP_PWKPhJ_G0018929
 protein coding gene Chr12:69040539-69043263 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0019215
 protein coding gene Chr12:77182633-77183927 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061062 Ensembl Gene Model | MGI Sequence Detail 1444 C57BL/6J ±  kb
transcript ENSMUST00000079363 Ensembl | MGI Sequence Detail 1444 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3645960
References
more
  • Summaries
    All 12
  • Earliest
    J:42359 Bartl S, et al., Identification of mouse histone deacetylase 1 as a growth factor-inducible gene. Mol Cell Biol. 1997 Sep;17(9):5033-43
  • Latest
    J:89931 Tou L, et al., Regulation of mammalian epithelial differentiation and intestine development by class I histone deacetylases. Mol Cell Biol. 2004 Apr;24(8):3132-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory