Gm10143 Gene Detail

Summary

• Symbol
  Gm10143
• Name
  predicted gene 10143

• Feature Type
  lncRNA gene
• IDs
  MGI:3704492
  NCBI Gene: 100038753
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:10175732-10179748 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 6.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704492	lncRNA gene	Chr19:10175732-10179748 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015381	unclassified non-coding RNA gene	Chr19:7521882-7525898 (+)
A/J	MGP_AJ_G0015355	unclassified non-coding RNA gene	Chr19:7005252-7009267 (+)
AKR/J	MGP_AKRJ_G0015319	unclassified non-coding RNA gene	Chr19:7285550-7289566 (+)
BALB/cJ	MGP_BALBcJ_G0015319	unclassified non-coding RNA gene	Chr19:7051755-7055770 (+)
C3H/HeJ	MGP_C3HHeJ_G0015143	unclassified non-coding RNA gene	Chr19:7172622-7176637 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015773	unclassified non-coding RNA gene	Chr19:7867006-7871022 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013514	unclassified non-coding RNA gene	Chr19:7423084-7427416 (+)
CAST/EiJ	MGP_CASTEiJ_G0014694	unclassified non-coding RNA gene	Chr19:6833281-6837259 (+)
CBA/J	MGP_CBAJ_G0015122	unclassified non-coding RNA gene	Chr19:7916442-7920457 (+)
DBA/2J	MGP_DBA2J_G0015217	unclassified non-coding RNA gene	Chr19:7018917-7022932 (+)
FVB/NJ	MGP_FVBNJ_G0015224	unclassified non-coding RNA gene	Chr19:7056582-7060598 (+)
LP/J	MGP_LPJ_G0015297	unclassified non-coding RNA gene	Chr19:7498384-7502400 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015250	unclassified non-coding RNA gene	Chr19:7823272-7827288 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015812	unclassified non-coding RNA gene	Chr19:7308172-7312188 (+)
PWK/PhJ	MGP_PWKPhJ_G0014484	unclassified non-coding RNA gene	Chr19:6459233-6463267 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014271	unclassified non-coding RNA gene	Chr19:6494762-6499732 (+)
WSB/EiJ	MGP_WSBEiJ_G0014801	unclassified non-coding RNA gene	Chr19:7190959-7194974 (+)

Homology

• Gene Tree
  Gm10143
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• UniProt
  1

• Ensembl
  ENSMUSG00000064032 (Evidence)
• NCBI Gene
  100038753

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000064032	Ensembl Gene Model | MGI Sequence Detail	4017	C57BL/6J
transcript	ENSMUST00000150038	Ensembl | MGI Sequence Detail	3332	Not Applicable
polypeptide	Q8CDJ0	UniProt | EBI | MGI Sequence Detail	171	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;