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Gm15340 Gene Detail
Summary
  • Symbol
    Gm15340
  • Name
    predicted gene 15340
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3705158
    NCBI Gene: 100040997
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:95701507-95702935 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 56.73 cM
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705158
 lncRNA gene Chr16:95701507-95702935 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005685
 lincRNA gene Chr16:97237762-97239092 (+)
A/J MGP_AJ_G0005672
 lincRNA gene Chr16:92629868-92631198 (+)
AKR/J MGP_AKRJ_G0005651
 lincRNA gene Chr16:95486645-95487975 (+)
BALB/cJ MGP_BALBcJ_G0005652
 lincRNA gene Chr16:93182299-93183629 (+)
C3H/HeJ MGP_C3HHeJ_G0005599
 lincRNA gene Chr16:96002392-96003722 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005809
 lincRNA gene Chr16:100319134-100320464 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005166
 lincRNA gene Chr16:90493767-90495044 (+)
CAST/EiJ MGP_CASTEiJ_G0005542
 lincRNA gene Chr16:96806353-96807655 (+)
CBA/J MGP_CBAJ_G0005587
 lincRNA gene Chr16:104620047-104621377 (+)
DBA/2J MGP_DBA2J_G0005604
 lincRNA gene Chr16:92522931-92524261 (+)
FVB/NJ MGP_FVBNJ_G0005631
 lincRNA gene Chr16:91687022-91688352 (+)
LP/J MGP_LPJ_G0005687
 lincRNA gene Chr16:96869048-96870378 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005616
 lincRNA gene Chr16:108882292-108883622 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005810
 lincRNA gene Chr16:96017129-96018459 (+)
PWK/PhJ MGP_PWKPhJ_G0005488
 lincRNA gene Chr16:92810606-92812008 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005407
 lincRNA gene Chr16:95567264-95568567 (+)
WSB/EiJ MGP_WSBEiJ_G0005593
 lincRNA gene Chr16:96285401-96286729 (+)



Homology
less
Human Diseases
less
  • References
    6 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    88 phenotype references
  • All Mutations and Alleles
    11
  • Endonuclease-mediated
    1
  • Gene trapped
    4
  • Spontaneous
    1
  • Targeted
    4
  • Genomic Mutations
    7 involving Gm15340
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085903 Ensembl Gene Model | MGI Sequence Detail 1429 C57BL/6J ±  kb
transcript ENSMUST00000144984 Ensembl | MGI Sequence Detail 802 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7
References
more
  • Summaries
    All 95
    Diseases 6
    Phenotypes 88
  • Earliest
    J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
  • Latest
    J:345472 Lana-Elola E, et al., Increased dosage of DYRK1A leads to congenital heart defects in a mouse model of Down syndrome. Sci Transl Med. 2024 Jan 24;16(731):eadd6883
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory