About   Help   FAQ
Astx3 Gene Detail
Summary
  • Symbol
    Astx3
  • Name
    amplified spermatogenic transcripts X encoded 3
  • Synonyms
    Gm14961
Location &
Maps
more
  • Sequence Map
    ChrX:124950168-124953054 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 49.81 cM
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705273
 lncRNA gene ChrX:124950168-124953054 (+)
129S1/SvImJ no annotation
A/J ENSMUSG00195020704
 lncRNA gene ChrX:107972214-107975090 (+)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210021017
 lncRNA gene ChrX:105131800-105134684 (+)
DBA/2J ENSMUSG00185024692
 lncRNA gene ChrX:118828302-118831188 (+)
FVB/NJ no annotation
JF1/MsJ no annotation
LP/J ENSMUSG00230004157
 lncRNA gene ChrX:125510726-125513612 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ ENSMUSG00225033491
 lncRNA gene ChrX:130174667-130177553 (+)
PWK/PhJ ENSLUMG00010009203
 lncRNA gene ChrX:102922141-102925026 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    9
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000095563 Ensembl Gene Model | MGI Sequence Detail 2887 C57BL/6J ±  kb
transcript ENSMUST00000123508 Ensembl | MGI Sequence Detail 1150 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:104746 Toure A, et al., Identification of novel Y chromosome encoded transcripts by testis transcriptome analysis of mice with deletions of the Y chromosome long arm. Genome Biol. 2005;6(12):R102
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
10/06/2026
MGI 6.29 		The Jackson Laboratory