Gm14508 Gene Detail

Summary

• Symbol
  Gm14508
• Name
  predicted gene 14508

• Feature Type
  lncRNA gene
• IDs
  MGI:3705279
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:116147375-116154164 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 56.10 cM

Strain
Comparison

• SNPs within 2kb
  294 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705279	lncRNA gene	Chr5:116147375-116154164 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004152	antisense lncRNA gene	Chr5:118944471-118950955 (+)
A/J	MGP_AJ_G0004131	antisense lncRNA gene	Chr5:114191010-114197483 (+)
AKR/J	MGP_AKRJ_G0004112	antisense lncRNA gene	Chr5:117856896-117863401 (+)
BALB/cJ	MGP_BALBcJ_G0004118	antisense lncRNA gene	Chr5:115593254-115599721 (+)
C3H/HeJ	MGP_C3HHeJ_G0004066	antisense lncRNA gene	Chr5:118374208-118380985 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004266	antisense lncRNA gene	Chr5:123513788-123520577 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003743	antisense lncRNA gene	Chr5:108963285-108970190 (+)
CAST/EiJ	MGP_CASTEiJ_G0004028	antisense lncRNA gene	Chr5:117333022-117339664 (+)
CBA/J	MGP_CBAJ_G0004060	antisense lncRNA gene	Chr5:128249888-128256681 (+)
DBA/2J	MGP_DBA2J_G0004075	antisense lncRNA gene	Chr5:114283134-114289621 (+)
FVB/NJ	MGP_FVBNJ_G0004092	antisense lncRNA gene	Chr5:113109349-113115964 (+)
LP/J	MGP_LPJ_G0004153	antisense lncRNA gene	Chr5:119501619-119508122 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004081	antisense lncRNA gene	Chr5:132546660-132553135 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004263	antisense lncRNA gene	Chr5:117339081-117345564 (+)
PWK/PhJ	MGP_PWKPhJ_G0003981	antisense lncRNA gene	Chr5:112937145-112944322 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003925	antisense lncRNA gene	Chr5:114887047-114893626 (+)
WSB/EiJ	MGP_WSBEiJ_G0004064	antisense lncRNA gene	Chr5:117936498-117943081 (+)

Homology

• Gene Tree
  Gm14508
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14508
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085376 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085376	Ensembl Gene Model | MGI Sequence Detail	6790	C57BL/6J
transcript	ENSMUST00000127049	Ensembl | MGI Sequence Detail	901	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm14508:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr48340	Chr5:116147382-116147389 (+)	11 bp