Gm15240 Pseudogene Detail

Summary

• Symbol
  Gm15240
• Name
  predicted gene 15240

• Feature Type
  pseudogene
• IDs
  MGI:3705404
  NCBI Gene: 100417872
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:166770516-166771220 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 78.52 cM

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705404	pseudogene	ChrX:166770501-166771220 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015011	pseudogene	ChrX:166184023-166184742 (+)
A/J	MGP_AJ_G0015001	pseudogene	ChrX:165311871-165312590 (+)
AKR/J	MGP_AKRJ_G0014940	pseudogene	ChrX:170614631-170615350 (+)
BALB/cJ	MGP_BALBcJ_G0014955	pseudogene	ChrX:163269973-163270692 (+)
C3H/HeJ	MGP_C3HHeJ_G0014794	pseudogene	ChrX:166498335-166499054 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015442	pseudogene	ChrX:171005999-171006718 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013061	pseudogene	ChrX:156081890-156082612 (+)
CAST/EiJ	MGP_CASTEiJ_G0014397	pseudogene	ChrX:145369715-145370439 (+)
CBA/J	MGP_CBAJ_G0014780	pseudogene	ChrX:175982002-175982721 (+)
DBA/2J	MGP_DBA2J_G0014863	pseudogene	ChrX:164102581-164103300 (+)
FVB/NJ	MGP_FVBNJ_G0014844	pseudogene	ChrX:163250350-163251069 (+)
LP/J	MGP_LPJ_G0014964	pseudogene	ChrX:167279939-167280658 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014890	pseudogene	ChrX:184698793-184699512 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015427	pseudogene	ChrX:165641186-165641905 (+)
PWK/PhJ	MGP_PWKPhJ_G0014190	pseudogene	ChrX:142102753-142103476 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013976	pseudogene	ChrX:145922217-145922944 (+)
WSB/EiJ	MGP_WSBEiJ_G0014479	pseudogene	ChrX:163471887-163472606 (+)

Homology

• Gene Tree
  Gm15240
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082915 (Evidence)
• NCBI Gene
  100417872

Representative Sequences			Length	Strain/Species
genomic	100417872	NCBI Gene Model | MGI Sequence Detail	705	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;