Gm14803 Pseudogene Detail

Summary

• Symbol
  Gm14803
• Name
  predicted gene 14803

• Feature Type
  pseudogene
• IDs
  MGI:3705495
  NCBI Gene: 105246636
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:95978296-95978830 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 42.69 cM

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705495	pseudogene	ChrX:95977937-95978902 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014640	pseudogene	ChrX:93335933-93336467 (-)
A/J	MGP_AJ_G0014649	pseudogene	ChrX:93460209-93460743 (-)
AKR/J	MGP_AKRJ_G0014572	pseudogene	ChrX:96010099-96010633 (-)
BALB/cJ	MGP_BALBcJ_G0014597	pseudogene	ChrX:92221837-92222371 (-)
C3H/HeJ	MGP_C3HHeJ_G0014433	pseudogene	ChrX:93788092-93788626 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015080	pseudogene	ChrX:96246640-96247174 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014057	pseudogene	ChrX:78222737-78223271 (-)
CBA/J	MGP_CBAJ_G0014420	pseudogene	ChrX:99172050-99172584 (-)
DBA/2J	MGP_DBA2J_G0014502	pseudogene	ChrX:92665629-92666163 (-)
FVB/NJ	MGP_FVBNJ_G0014488	pseudogene	ChrX:92060929-92061463 (-)
LP/J	MGP_LPJ_G0014600	pseudogene	ChrX:94323677-94324211 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014527	pseudogene	ChrX:103496403-103496937 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015048	pseudogene	ChrX:93028044-93028578 (-)
PWK/PhJ	MGP_PWKPhJ_G0013865	pseudogene	ChrX:75908013-75908547 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013656	pseudogene	ChrX:79061725-79062256 (-)
WSB/EiJ	MGP_WSBEiJ_G0014136	pseudogene	ChrX:91847166-91847700 (-)

Homology

• Gene Tree
  Gm14803
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000082397 (Evidence)
• NCBI Gene
  105246636

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082397	Ensembl Gene Model | MGI Sequence Detail	535	C57BL/6J
transcript	ENSMUST00000117163	Ensembl | MGI Sequence Detail	361	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm14803:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163823	ChrX:95978850-95978856 (-)	-23 bp