Gm15442 Pseudogene Detail

Summary

• Symbol
  Gm15442
• Name
  predicted gene 15442
• Synonyms
  ENSMUSG00000074556

• Feature Type
  pseudogene
• IDs
  MGI:3705708
  NCBI Gene: 100041691
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:78394115-78395944 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 34.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705708	pseudogene	Chr3:78393889-78395988 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013835	pseudogene	Chr7:22449083-22455014 (+)
A/J	MGP_AJ_G0013833	pseudogene	Chr7:21933076-21939706 (+)
AKR/J	MGP_AKRJ_G0013781	pseudogene	Chr7:22455798-22464325 (+)
BALB/cJ	MGP_BALBcJ_G0013816	pseudogene	Chr7:22157608-22163280 (+)
C3H/HeJ	MGP_C3HHeJ_G0013638	pseudogene	Chr7:22863510-22869346 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0012123	pseudogene	Chr7:23439632-23445638 (+)
CAST/EiJ	MGP_CASTEiJ_G0013315	pseudogene	Chr7:16318732-16328107 (+)
CBA/J	MGP_CBAJ_G0013619	pseudogene	Chr7:24057062-24064932 (+)
DBA/2J	MGP_DBA2J_G0013696	pseudogene	Chr7:21882018-21888177 (+)
FVB/NJ	MGP_FVBNJ_G0013692	pseudogene	Chr7:21838474-21851220 (+)
LP/J	MGP_LPJ_G0013777	pseudogene	Chr7:22809618-22816603 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013711	pseudogene	Chr7:23870629-23877389 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014189	pseudogene	Chr7:22158337-22167328 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0012904	pseudogene	Chr7:13495986-13502945 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15442
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15442
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000084370 (Evidence)
• NCBI Gene
  100041691

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084370	Ensembl Gene Model | MGI Sequence Detail	1830	C57BL/6J
transcript	ENSMUST00000117905	Ensembl | MGI Sequence Detail	1527	Not Applicable

Other
Accession IDs

MGI:3704219

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426