Gm15445 Gene Detail

Summary

• Symbol
  Gm15445
• Name
  predicted gene 15445

• Feature Type
  lncRNA gene
• IDs
  MGI:3707341
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:135080701-135081544 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 58.24 cM

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3707341	lncRNA gene	Chr1:135080701-135081544 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002749	antisense lncRNA gene	Chr1:138889521-138890432 (+)
A/J	MGP_AJ_G0002725	antisense lncRNA gene	Chr1:133645605-133646496 (+)
AKR/J	MGP_AKRJ_G0002706	antisense lncRNA gene	Chr1:137622923-137623804 (+)
BALB/cJ	MGP_BALBcJ_G0002712	antisense lncRNA gene	Chr1:133959644-133960487 (+)
C3H/HeJ	MGP_C3HHeJ_G0002670	antisense lncRNA gene	Chr1:137719469-137720303 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002855	antisense lncRNA gene	Chr1:143916420-143917263 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002402	antisense lncRNA gene	Chr1:126756893-126757646 (+)
CAST/EiJ	MGP_CASTEiJ_G0002643	antisense lncRNA gene	Chr1:136791318-136792159 (+)
CBA/J	MGP_CBAJ_G0002666	antisense lncRNA gene	Chr1:148882451-148883206 (+)
DBA/2J	MGP_DBA2J_G0002672	antisense lncRNA gene	Chr1:132647265-132649150 (+)
FVB/NJ	MGP_FVBNJ_G0002692	antisense lncRNA gene	Chr1:131283986-131285920 (+)
LP/J	MGP_LPJ_G0002750	antisense lncRNA gene	Chr1:140134862-140135705 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002682	antisense lncRNA gene	Chr1:154576633-154578652 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0002600	antisense lncRNA gene	Chr1:131670585-131671427 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002552	antisense lncRNA gene	Chr1:136331468-136334156 (+)
WSB/EiJ	MGP_WSBEiJ_G0002672	antisense lncRNA gene	Chr1:137400085-137402913 (+)

Homology

• Gene Tree
  Gm15445
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm15445
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000085311 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085311	Ensembl Gene Model | MGI Sequence Detail	844	C57BL/6J
transcript	ENSMUST00000146700	Ensembl | MGI Sequence Detail	603	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm15445:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8945	Chr1:135080538-135080574 (+)	-145 bp