Gm15368 Pseudogene Detail

Summary

• Symbol
  Gm15368
• Name
  predicted gene 15368

• Feature Type
  pseudogene
• IDs
  MGI:3707462
  NCBI Gene: 100418108
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr1:88114393-88115241 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 44.54 cM

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3707462	pseudogene	Chr1:88114384-88115241 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039900	pseudogene	Chr1:89585910-89586767 (+)
A/J	MGP_AJ_G0039907	pseudogene	Chr1:86298999-86299856 (+)
AKR/J	MGP_AKRJ_G0039829	pseudogene	Chr1:88815729-88816586 (+)
BALB/cJ	MGP_BALBcJ_G0039884	pseudogene	Chr1:86422016-86422873 (+)
C3H/HeJ	MGP_C3HHeJ_G0039531	pseudogene	Chr1:89085632-89086489 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040454	pseudogene	Chr1:92960039-92960896 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037034	pseudogene	Chr1:80676411-80677268 (+)
CAST/EiJ	MGP_CASTEiJ_G0038647	pseudogene	Chr1:88305180-88306037 (+)
CBA/J	MGP_CBAJ_G0039497	pseudogene	Chr1:95957505-95958362 (+)
DBA/2J	MGP_DBA2J_G0039702	pseudogene	Chr1:85536268-85537125 (+)
FVB/NJ	MGP_FVBNJ_G0039663	pseudogene	Chr1:84624107-84624964 (+)
LP/J	MGP_LPJ_G0039737	pseudogene	Chr1:90666177-90667034 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039655	pseudogene	Chr1:99189832-99190689 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040549	pseudogene	Chr1:88915193-88916050 (+)
PWK/PhJ	MGP_PWKPhJ_G0038327	pseudogene	Chr1:84892270-84893127 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038061	pseudogene	Chr1:87841445-87842280 (+)
WSB/EiJ	MGP_WSBEiJ_G0038864	pseudogene	Chr1:88583768-88584625 (+)

Homology

• Gene Tree
  Gm15368
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15368
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081488 (Evidence)
• NCBI Gene
  100418108

Representative Sequences			Length	Strain/Species
genomic	100418108	NCBI Gene Model | MGI Sequence Detail	849	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm15368:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7947	Chr1:88114309-88114312 (+)	-82 bp
Tssr7948	Chr1:88114324-88114341 (+)	-60 bp
Tssr7949	Chr1:88114348-88114359 (+)	-39 bp