Gm9959 Pseudogene Detail

Summary

• Symbol
  Gm9959
• Name
  predicted gene 9959

• Feature Type
  pseudogene
• IDs
  MGI:3708636
  NCBI Gene: 100043697
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:81035558-81036898 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 50.97 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708636	pseudogene	Chr17:81035558-81036898 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036420	pseudogene	Chr17:83674412-83674803 (+)
A/J	MGP_AJ_G0036405	pseudogene	Chr17:81120687-81121078 (+)
AKR/J	MGP_AKRJ_G0036357	pseudogene	Chr17:82388943-82389334 (+)
BALB/cJ	MGP_BALBcJ_G0036397	pseudogene	Chr17:80975470-80975861 (+)
C3H/HeJ	MGP_C3HHeJ_G0036089	pseudogene	Chr17:83239243-83239634 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0036907	pseudogene	Chr17:86705038-86705412 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034019	pseudogene	Chr17:76455564-76455949 (+)
CAST/EiJ	MGP_CASTEiJ_G0035287	pseudogene	Chr17:83933284-83933675 (+)
CBA/J	MGP_CBAJ_G0036062	pseudogene	Chr17:90340100-90340491 (+)
DBA/2J	MGP_DBA2J_G0036236	pseudogene	Chr17:79595387-79595778 (+)
FVB/NJ	MGP_FVBNJ_G0036191	pseudogene	Chr17:79094616-79095007 (+)
LP/J	MGP_LPJ_G0036289	pseudogene	Chr17:84516321-84516712 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036194	pseudogene	Chr17:90371729-90372120 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037019	pseudogene	Chr17:82869966-82870357 (+)
PWK/PhJ	MGP_PWKPhJ_G0034986	pseudogene	Chr17:79158671-79159062 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0034802	pseudogene	Chr17:79657613-79658004 (+)
WSB/EiJ	MGP_WSBEiJ_G0035479	pseudogene	Chr17:83696472-83696863 (+)

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1
• UniProt
  1

• NCBI Gene
  100043697

Representative Sequences			Length	Strain/Species
genomic	100043697	NCBI Gene Model | MGI Sequence Detail	1341	C57BL/6J
transcript	AK082127	GenBank | ENA | DDBJ | MGI Sequence Detail	1344	C57BL/6J
polypeptide	Q8C4I1	UniProt | EBI | MGI Sequence Detail	130	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;