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Gm10390 Gene Detail
Summary
  • Symbol
    Gm10390
  • Name
    predicted gene 10390
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3708725
    NCBI Gene: 100503427
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:120259161-120277328 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 60.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    575 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3708725
 lncRNA gene Chr5:120259161-120277328 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004162
 antisense lncRNA gene Chr5:123434318-123452491 (-)
A/J MGP_AJ_G0004141
 antisense lncRNA gene Chr5:118343136-118361309 (-)
AKR/J MGP_AKRJ_G0004122
 antisense lncRNA gene Chr5:122175346-122193512 (-)
BALB/cJ MGP_BALBcJ_G0004127
 antisense lncRNA gene Chr5:119768958-119787131 (-)
C3H/HeJ MGP_C3HHeJ_G0004076
 antisense lncRNA gene Chr5:122708205-122726378 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004276
 antisense lncRNA gene Chr5:128080767-128098934 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003752
 antisense lncRNA gene Chr5:113073749-113091669 (-)
CAST/EiJ MGP_CASTEiJ_G0004037
 antisense lncRNA gene Chr5:121799211-121817219 (-)
CBA/J MGP_CBAJ_G0004070
 antisense lncRNA gene Chr5:133067319-133085492 (-)
DBA/2J MGP_DBA2J_G0004085
 antisense lncRNA gene Chr5:118445306-118463479 (-)
FVB/NJ MGP_FVBNJ_G0004101
 antisense lncRNA gene Chr5:117354062-117372235 (-)
LP/J MGP_LPJ_G0004163
 antisense lncRNA gene Chr5:123909921-123928082 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004091
 antisense lncRNA gene Chr5:137071323-137089496 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004273
 antisense lncRNA gene Chr5:121740068-121758241 (-)
PWK/PhJ MGP_PWKPhJ_G0003991
 antisense lncRNA gene Chr5:117191570-117209559 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003934
 antisense lncRNA gene Chr5:119388095-119406353 (-)
WSB/EiJ MGP_WSBEiJ_G0004074
 antisense lncRNA gene Chr5:122327906-122346079 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm10390
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100503427 NCBI Gene Model | MGI Sequence Detail 18168 C57BL/6J ±  kb
transcript NR_045793 RefSeq | MGI Sequence Detail 3977 ZRU/MplStud  
polypeptide Q3TEP5 UniProt | EBI | MGI Sequence Detail 98 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 11
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory