Gm10612 Gene Detail

Summary

• Symbol
  Gm10612
• Name
  predicted gene 10612

• Feature Type
  lncRNA gene
• IDs
  MGI:3708796
  NCBI Gene: 102638502
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:123424599-123426899 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 71.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708796	lncRNA gene	Chr8:123424598-123426899 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004597	antisense lncRNA gene	Chr8:126268363-126270662 (+)
A/J	MGP_AJ_G0004577	antisense lncRNA gene	Chr8:121029542-121031849 (+)
AKR/J	MGP_AKRJ_G0004561	antisense lncRNA gene	Chr8:124559230-124561535 (+)
BALB/cJ	MGP_BALBcJ_G0004562	antisense lncRNA gene	Chr8:121228630-121230937 (+)
C3H/HeJ	MGP_C3HHeJ_G0004511	antisense lncRNA gene	Chr8:125261929-125264236 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004711	antisense lncRNA gene	Chr8:130499394-130501694 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004162	antisense lncRNA gene	Chr8:113859173-113861474 (+)
CAST/EiJ	MGP_CASTEiJ_G0004469	antisense lncRNA gene	Chr8:125344090-125346398 (+)
CBA/J	MGP_CBAJ_G0004505	antisense lncRNA gene	Chr8:135281838-135284138 (+)
DBA/2J	MGP_DBA2J_G0004520	antisense lncRNA gene	Chr8:120219053-120221353 (+)
FVB/NJ	MGP_FVBNJ_G0004537	antisense lncRNA gene	Chr8:119368948-119371248 (+)
LP/J	MGP_LPJ_G0004601	antisense lncRNA gene	Chr8:126392519-126394818 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004526	antisense lncRNA gene	Chr8:137428804-137431104 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004711	antisense lncRNA gene	Chr8:124743453-124745753 (+)
PWK/PhJ	MGP_PWKPhJ_G0004422	antisense lncRNA gene	Chr8:120039270-120041575 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004363	antisense lncRNA gene	Chr8:123468919-123471221 (+)
WSB/EiJ	MGP_WSBEiJ_G0004510	antisense lncRNA gene	Chr8:125493312-125495615 (+)

Homology

• Gene Tree
  Gm10612
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000090174 (Evidence)
• NCBI Gene
  102638502

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090174	Ensembl Gene Model | MGI Sequence Detail	2301	C57BL/6J
transcript	ENSMUST00000162198	Ensembl | MGI Sequence Detail	1681	Not Applicable
polypeptide	Q3TYN6	UniProt | EBI | MGI Sequence Detail	114	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;