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Cldn24 Gene Detail
Summary
  • Symbol
    Cldn24
  • Name
    claudin 24
  • Synonyms
    Gm10107
  • Feature Type
    protein coding gene
  • IDs
    MGI:3712484
    NCBI Gene: 100039801
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr8:48275178-48275840 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 26.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3712484
 protein coding gene Chr8:48275178-48275840 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033602
 protein coding gene Chr8:47026806-47027710 (+)
A/J MGP_AJ_G0033584
 protein coding gene Chr8:45177097-45177839 (+)
AKR/J MGP_AKRJ_G0033509
 protein coding gene Chr8:46491665-46492437 (+)
BALB/cJ MGP_BALBcJ_G0033581
 protein coding gene Chr8:45358455-45359427 (+)
C3H/HeJ MGP_C3HHeJ_G0033290
 protein coding gene Chr8:47059151-47061862 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034097
 protein coding gene Chr8:48821446-48823728 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031045
 protein coding gene Chr8:41413673-41416890 (+)
CAST/EiJ MGP_CASTEiJ_G0032616
 protein coding gene Chr8:46526331-46527107 (+)
CBA/J MGP_CBAJ_G0033269
 protein coding gene Chr8:50736053-50736726 (+)
DBA/2J MGP_DBA2J_G0033422
 protein coding gene Chr8:44982119-44982891 (+)
FVB/NJ MGP_FVBNJ_G0033363
 protein coding gene Chr8:44449510-44450290 (+)
LP/J MGP_LPJ_G0033510
 protein coding gene Chr8:47012266-47013038 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033407
 protein coding gene Chr8:50770908-50773730 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034115
 protein coding gene Chr8:46688266-46691863 (+)
PWK/PhJ MGP_PWKPhJ_G0032324
 protein coding gene Chr8:44514117-44515099 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032160
 protein coding gene Chr8:45852781-45853633 (+)
WSB/EiJ MGP_WSBEiJ_G0032732
 protein coding gene Chr8:46937893-46938665 (+)



Homology
more
  • Human Ortholog
    CLDN24, claudin 24
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CLDN24, claudin 24
  • Synonyms
    CLDN21
  • Links
    NCBI Gene ID: 100132463
    neXtProt AC: NX_A6NM45
    UniProt: A6NM45

  • Chr Location
    4q35.1; chr4:183321764-183322426 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    738
  • Tissues
    16
  • cDNA Data
    1
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100039801 NCBI Gene Model | MGI Sequence Detail 663 C57BL/6J ±  kb
transcript NM_001111318 RefSeq | MGI Sequence Detail 663 mixed  
polypeptide NP_001104788 RefSeq | MGI Sequence Detail 220 mixed  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 2
    Primer pair 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:313345 Higashi AY, et al., Claudin-9 constitutes tight junctions of folliculo-stellate cells in the anterior pituitary gland. Sci Rep. 2021 Nov 4;11(1):21642
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory