Rps12-ps26 Pseudogene Detail

Summary

• Symbol
  Rps12-ps26
• Name
  ribosomal protein S12, pseudogene 26
• Synonyms
  Gm11717

• Feature Type
  pseudogene
• IDs
  MGI:3713332
  NCBI Gene: 100503362
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:107062726-107063058 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 70.19 cM

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3713332	pseudogene	Chr11:107062726-107063058 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010862	pseudogene	Chr11:110549944-110550276 (-)
A/J	MGP_AJ_G0010859	pseudogene	Chr11:105810780-105811112 (-)
AKR/J	MGP_AKRJ_G0010819	pseudogene	Chr11:108974551-108974883 (-)
BALB/cJ	MGP_BALBcJ_G0010837	pseudogene	Chr11:106222732-106223064 (-)
C3H/HeJ	MGP_C3HHeJ_G0010738	pseudogene	Chr11:109275992-109276324 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011108	pseudogene	Chr11:113961970-113962302 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009716	pseudogene	Chr11:103085075-103085395 (-)
CAST/EiJ	MGP_CASTEiJ_G0010562	pseudogene	Chr11:110358152-110358484 (-)
CBA/J	MGP_CBAJ_G0010709	pseudogene	Chr11:118678189-118678521 (-)
DBA/2J	MGP_DBA2J_G0010756	pseudogene	Chr11:105287439-105287771 (-)
FVB/NJ	MGP_FVBNJ_G0010773	pseudogene	Chr11:104784149-104784481 (-)
LP/J	MGP_LPJ_G0010844	pseudogene	Chr11:110993315-110993647 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010749	pseudogene	Chr11:117892319-117892651 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011087	pseudogene	Chr11:109491501-109491833 (-)
PWK/PhJ	MGP_PWKPhJ_G0010452	pseudogene	Chr11:106403808-106409334 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010268	pseudogene	Chr11:109267038-109267370 (-)
WSB/EiJ	MGP_WSBEiJ_G0010615	pseudogene	Chr11:109456638-109456970 (-)

Homology

• Gene Tree
  Rps12-ps26
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081103 (Evidence)
• NCBI Gene
  100503362

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081103	Ensembl Gene Model | MGI Sequence Detail	333	C57BL/6J
transcript	ENSMUST00000117751	Ensembl | MGI Sequence Detail	333	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;