Vmn2r-ps70 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps70
• Name
  vomeronasal 2, receptor, pseudogene 70

• Feature Type
  pseudogene
• IDs
  MGI:3761313
  NCBI Gene: 100124563
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85161134-85161358 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761313	pseudogene	Chr7:85161056-85161358 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040611	pseudogene	Chr7:85578966-85579240 (-)
AKR/J	MGP_AKRJ_G0040541	pseudogene	Chr7:87560082-87560356 (-)
BALB/cJ	MGP_BALBcJ_G0040602	pseudogene	Chr7:85229880-85230154 (-)
C3H/HeJ	MGP_C3HHeJ_G0040239	pseudogene	Chr7:88066561-88066835 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041292	pseudogene	Chr7:91214879-91215180 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040206	pseudogene	Chr7:94204689-94204963 (-)
DBA/2J	MGP_DBA2J_G0040418	pseudogene	Chr7:84097410-84097684 (-)
FVB/NJ	MGP_FVBNJ_G0040343	pseudogene	Chr7:84039013-84039314 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041343	pseudogene	Chr7:86911626-86911927 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Vmn2r-ps70
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps70
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000092431 (Evidence)
• NCBI Gene
  100124563

Representative Sequences			Length	Strain/Species
genomic	100124563	NCBI Gene Model | MGI Sequence Detail	225	C57BL/6J

References

• Summaries
  All 28

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5