Vmn2r-ps75 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps75
• Name
  vomeronasal 2, receptor, pseudogene 75

• Feature Type
  pseudogene
• IDs
  MGI:3761320
  NCBI Gene: 100124565
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85447522-85448144 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761320	pseudogene	Chr7:85447522-85448165 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040616	pseudogene	Chr7:85918656-85919331 (+)
AKR/J	MGP_AKRJ_G0040546	pseudogene	Chr7:87939996-87940612 (+)
BALB/cJ	MGP_BALBcJ_G0040607	pseudogene	Chr7:85570452-85571068 (+)
C3H/HeJ	MGP_C3HHeJ_G0040244	pseudogene	Chr7:88351837-88352453 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041299	pseudogene	Chr7:91536686-91537302 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040211	pseudogene	Chr7:94523911-94524527 (+)
DBA/2J	MGP_DBA2J_G0040423	pseudogene	Chr7:84406275-84406891 (+)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041350	pseudogene	Chr7:87223975-87224591 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Vmn2r-ps75
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps75
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000092179 (Evidence)
• NCBI Gene
  100124565

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092179	Ensembl Gene Model | MGI Sequence Detail	623	C57BL/6J
transcript	ENSMUST00000173251	Ensembl | MGI Sequence Detail	219	Not Applicable

References

• Summaries
  All 28

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5