Vmn2r-ps77 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps77
• Name
  vomeronasal 2, receptor, pseudogene 77

• Feature Type
  pseudogene
• IDs
  MGI:3761322
  NCBI Gene: 100124567
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85471146-85471472 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761322	pseudogene	Chr7:85471122-85471472 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040617	pseudogene	Chr7:88000453-88000772 (+)
A/J	MGP_AJ_G0040618	pseudogene	Chr7:85942301-85942620 (+)
AKR/J	MGP_AKRJ_G0040548	pseudogene	Chr7:87963646-87963965 (+)
BALB/cJ	MGP_BALBcJ_G0040609	pseudogene	Chr7:85594381-85594700 (+)
C3H/HeJ	MGP_C3HHeJ_G0040246	pseudogene	Chr7:88378210-88378529 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041301	pseudogene	Chr7:91573057-91573376 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039291	pseudogene	Chr7:79744231-79744550 (+)
CBA/J	MGP_CBAJ_G0040213	pseudogene	Chr7:94549707-94550026 (+)
DBA/2J	MGP_DBA2J_G0040425	pseudogene	Chr7:84429621-84429940 (+)
FVB/NJ	MGP_FVBNJ_G0040350	pseudogene	Chr7:84371026-84371345 (+)
LP/J	MGP_LPJ_G0040461	pseudogene	Chr7:89302419-89302738 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040342	pseudogene	Chr7:94824976-94825295 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041352	pseudogene	Chr7:87253931-87254250 (+)
PWK/PhJ	MGP_PWKPhJ_G0038954	pseudogene	Chr7:77711633-77711952 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038657	pseudogene	Chr7:74719518-74719837 (-)
WSB/EiJ	MGP_WSBEiJ_G0039542	pseudogene	Chr7:87846621-87846940 (+)

Homology

• Gene Tree
  Vmn2r-ps77
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps77
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000092287 (Evidence)
• NCBI Gene
  100124567

Representative Sequences			Length	Strain/Species
genomic	100124567	NCBI Gene Model | MGI Sequence Detail	327	C57BL/6J

References

• Summaries
  All 28

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5