Vmn2r-ps82 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps82
• Name
  vomeronasal 2, receptor, pseudogene 82
• Synonyms
  Gm7216

• Feature Type
  pseudogene
• IDs
  MGI:3761327
  NCBI Gene: 637667
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85702497-85712669 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.47 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  467 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761327	pseudogene	Chr7:85702445-85712669 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040606	pseudogene	Chr7:85175919-85775489 (+)
AKR/J	MGP_AKRJ_G0040536	pseudogene	Chr7:87171545-87716691 (+)
BALB/cJ	MGP_BALBcJ_G0040597	pseudogene	Chr7:84840690-85338613 (+)
C3H/HeJ	MGP_C3HHeJ_G0040234	pseudogene	Chr7:87673944-88172393 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041290	pseudogene	Chr7:91088164-91102769 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040201	pseudogene	Chr7:93725022-94320730 (+)
DBA/2J	MGP_DBA2J_G0040413	pseudogene	Chr7:83691378-84204214 (+)
FVB/NJ	MGP_FVBNJ_G0040357	pseudogene	Chr7:84622593-84733655 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041357	pseudogene	Chr7:87517563-87529311 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Vmn2r-ps82
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps82
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000092330 (Evidence)
• NCBI Gene
  637667

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092330	Ensembl Gene Model | MGI Sequence Detail	10173	C57BL/6J
transcript	ENSMUST00000174222	Ensembl | MGI Sequence Detail	2052	Not Applicable

Other
Accession IDs

MGI:3645768

References

• Summaries
  All 30

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5