Vmn2r-ps84 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps84
• Name
  vomeronasal 2, receptor, pseudogene 84

• Feature Type
  pseudogene
• IDs
  MGI:3761329
  NCBI Gene: 100039471
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85775541-85776437 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761329	pseudogene	Chr7:85775541-85776501 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040622	pseudogene	Chr7:88358764-88359660 (+)
A/J	MGP_AJ_G0040622	pseudogene	Chr7:86296970-86297866 (+)
AKR/J	MGP_AKRJ_G0040552	pseudogene	Chr7:88342696-88343592 (+)
BALB/cJ	MGP_BALBcJ_G0040613	pseudogene	Chr7:85937992-85938888 (+)
C3H/HeJ	MGP_C3HHeJ_G0040250	pseudogene	Chr7:88706879-88707775 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041307	pseudogene	Chr7:91898821-91899717 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039293	pseudogene	Chr7:80140137-80141034 (+)
CBA/J	MGP_CBAJ_G0040217	pseudogene	Chr7:94898956-94899852 (+)
DBA/2J	MGP_DBA2J_G0040429	pseudogene	Chr7:84785141-84786037 (+)
FVB/NJ	MGP_FVBNJ_G0040359	pseudogene	Chr7:84687691-84688587 (+)
LP/J	MGP_LPJ_G0040466	pseudogene	Chr7:89619160-89620056 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040348	pseudogene	Chr7:95324237-95325133 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041359	pseudogene	Chr7:87586092-87586988 (+)
PWK/PhJ	MGP_PWKPhJ_G0038955	pseudogene	Chr7:77769909-77770803 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038659	pseudogene	Chr7:74821637-74822543 (+)
WSB/EiJ	MGP_WSBEiJ_G0039545	pseudogene	Chr7:88200792-88201688 (+)

Homology

• Gene Tree
  Vmn2r-ps84
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps84
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000092532 (Evidence)
• NCBI Gene
  100039471

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092532	Ensembl Gene Model | MGI Sequence Detail	897	C57BL/6J
transcript	ENSMUST00000173377	Ensembl | MGI Sequence Detail	897	Not Applicable

References

• Summaries
  All 28

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5