Ftl1-ps1 Pseudogene Detail

Summary

• Symbol
  Ftl1-ps1
• Name
  ferritin light polypeptide 1, pseudogene 1
• Synonyms
  EG665937, Gm10116

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3779109
  NCBI Gene: 634386
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:74554516-74555444 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 40.27 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779109	pseudogene	Chr13:74547813-74555465 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0022494	protein coding gene	Chr16:5287368-5288248 (-)
A/J	MGP_AJ_G0022456	protein coding gene	Chr16:4977725-4978606 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0025272	protein coding gene	Chr19:58887732-58888546 (-)
C3H/HeJ	MGP_C3HHeJ_G0017938	protein coding gene	Chr11:44278959-44279509 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0025300	protein coding gene	Chr3:87609519-87610274 (-)
CAST/EiJ	MGP_CASTEiJ_G0021754	protein coding gene	Chr16:5311096-5313241 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0022303	protein coding gene	Chr16:5005618-5006497 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0022325	protein coding gene	Chr16:5436451-5437330 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022922	protein coding gene	Chr16:5203200-5204079 (-)
PWK/PhJ	MGP_PWKPhJ_G0021494	protein coding gene	Chr16:5195459-5196214 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0026242	protein coding gene	Chr3:91187999-91188635 (-)
WSB/EiJ	MGP_WSBEiJ_G0017551	protein coding gene	Chr11:44095937-44096478 (+)

Homology

• Gene Tree
  Ftl1-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Ftl1-ps1
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000062382 (Evidence)
• NCBI Gene
  634386

Representative Sequences			Length	Strain/Species
genomic	634386	NCBI Gene Model | MGI Sequence Detail	929	C57BL/6J

Other
Accession IDs

MGI:3648231

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Ftl1-ps1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120355	Chr13:74554506-74554515 (+)	-5 bp