Gm10961 Gene Detail

Summary

• Symbol
  Gm10961
• Name
  predicted gene 10961

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3779172
  NCBI Gene: 102639972
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:107539170-107542017 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 46.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779172	protein coding gene	Chr3:107539170-107542086 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0027753	protein coding gene	Chr3:109130558-109132300 (+)
A/J	MGP_AJ_G0027713	protein coding gene	Chr3:105674753-105676505 (+)
AKR/J	MGP_AKRJ_G0027678	protein coding gene	Chr3:108249823-108251591 (+)
BALB/cJ	MGP_BALBcJ_G0027725	protein coding gene	Chr3:105367942-105369706 (+)
C3H/HeJ	MGP_C3HHeJ_G0027455	protein coding gene	Chr3:108597142-108598860 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0028169	protein coding gene	Chr3:113221664-113224510 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0025507	protein coding gene	Chr3:101830766-101832734 (+)
CAST/EiJ	MGP_CASTEiJ_G0026911	protein coding gene	Chr3:107978469-107980225 (+)
CBA/J	MGP_CBAJ_G0027430	protein coding gene	Chr3:117049837-117051900 (+)
DBA/2J	MGP_DBA2J_G0027572	protein coding gene	Chr3:104869935-104871705 (+)
FVB/NJ	MGP_FVBNJ_G0027540	protein coding gene	Chr3:102750711-102752700 (+)
LP/J	MGP_LPJ_G0027679	protein coding gene	Chr3:110559447-110561203 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0027570	protein coding gene	Chr3:123153691-123155390 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0028224	protein coding gene	Chr3:107849285-107851056 (+)
PWK/PhJ	MGP_PWKPhJ_G0026637	protein coding gene	Chr3:104611686-104613453 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0026457	protein coding gene	Chr3:105972555-105974473 (+)
WSB/EiJ	MGP_WSBEiJ_G0026991	protein coding gene	Chr3:108372912-108374650 (+)

Homology

• Gene Tree
  Gm10961
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  APF
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000078604 (Evidence)
• NCBI Gene
  102639972

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000078604	Ensembl Gene Model | MGI Sequence Detail	2848	C57BL/6J
transcript	ENSMUST00000106703	Ensembl | MGI Sequence Detail	1919	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;