Gm11025 Pseudogene Detail

Summary

• Symbol
  Gm11025
• Name
  predicted gene 11025

• Feature Type
  pseudogene
• IDs
  MGI:3779248
  NCBI Gene: 100303649
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:57319633-57320098 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 24.70 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779248	pseudogene	Chr12:57318787-57320098 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010907	pseudogene	Chr12:56449946-56450411 (-)
A/J	MGP_AJ_G0010911	pseudogene	Chr12:54362821-54363286 (-)
AKR/J	MGP_AKRJ_G0010865	pseudogene	Chr12:56091303-56091768 (-)
BALB/cJ	MGP_BALBcJ_G0010887	pseudogene	Chr12:54728268-54728733 (-)
C3H/HeJ	MGP_C3HHeJ_G0010784	pseudogene	Chr12:56157001-56157466 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011158	pseudogene	Chr12:58107692-58108157 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009769	pseudogene	Chr12:52814718-52817010 (-)
CAST/EiJ	MGP_CASTEiJ_G0010615	pseudogene	Chr12:51080518-51080983 (-)
CBA/J	MGP_CBAJ_G0010758	pseudogene	Chr12:60164813-60165278 (-)
DBA/2J	MGP_DBA2J_G0010804	pseudogene	Chr12:54275939-54276404 (-)
FVB/NJ	MGP_FVBNJ_G0010816	pseudogene	Chr12:53572970-53573435 (-)
LP/J	MGP_LPJ_G0010889	pseudogene	Chr12:56408602-56409067 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010798	pseudogene	Chr12:61700451-61700916 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011142	pseudogene	Chr12:55538967-55539432 (-)
PWK/PhJ	MGP_PWKPhJ_G0010505	pseudogene	Chr12:48657000-48657465 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010318	pseudogene	Chr12:49968100-49968569 (-)
WSB/EiJ	MGP_WSBEiJ_G0010661	pseudogene	Chr12:56066646-56067111 (-)

Homology

• Gene Tree
  Gm11025
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11025
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000078982 (Evidence)
• NCBI Gene
  100303649

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000078982	Ensembl Gene Model | MGI Sequence Detail	466	C57BL/6J
transcript	ENSMUST00000140773	Ensembl | MGI Sequence Detail	466	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;