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Gm5091 Gene Detail
Summary
  • Symbol
    Gm5091
  • Name
    predicted gene 5091
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3779456
    NCBI Gene: 328747
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:15451847-15461045 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 8.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    347 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779456
 lncRNA gene Chr17:15451839-15468179 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005693
 lincRNA gene Chr17:13064435-13073633 (-)
A/J MGP_AJ_G0005681
 lincRNA gene Chr17:12823546-12832744 (-)
AKR/J MGP_AKRJ_G0005660
 lincRNA gene Chr17:12784957-12794155 (-)
BALB/cJ MGP_BALBcJ_G0005661
 lincRNA gene Chr17:12772529-12781727 (-)
C3H/HeJ MGP_C3HHeJ_G0005608
 lincRNA gene Chr17:12968417-12977615 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005818
 lincRNA gene Chr17:13669966-13679164 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005173
 lincRNA gene Chr17:10839528-10849178 (-)
CAST/EiJ MGP_CASTEiJ_G0005550
 lincRNA gene Chr17:12883299-12892482 (-)
CBA/J MGP_CBAJ_G0005596
 lincRNA gene Chr17:14112209-14121407 (-)
DBA/2J MGP_DBA2J_G0005614
 lincRNA gene Chr17:12547074-12556272 (-)
FVB/NJ MGP_FVBNJ_G0005640
 lincRNA gene Chr17:12392341-12401539 (-)
LP/J MGP_LPJ_G0005696
 lincRNA gene Chr17:13058351-13067549 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005625
 lincRNA gene Chr17:13656669-13665875 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005819
 lincRNA gene Chr17:13018748-13027946 (-)
PWK/PhJ MGP_PWKPhJ_G0005496
 lincRNA gene Chr17:12029646-12038850 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005415
 lincRNA gene Chr17:11983859-11993065 (-)
WSB/EiJ MGP_WSBEiJ_G0005602
 lincRNA gene Chr17:13337327-13346525 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 328747 NCBI Gene Model | MGI Sequence Detail 9199 C57BL/6J ±  kb
transcript NR_046164 RefSeq | MGI Sequence Detail 1179 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory