Gm5441 Gene Detail

Summary

• Symbol
  Gm5441
• Name
  predicted gene 5441

• Feature Type
  lncRNA gene
• IDs
  MGI:3779489
  NCBI Gene: 432713
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:117198141-117300632 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779489	lncRNA gene	Chr12:117198141-117300642 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003165	antisense lncRNA gene	Chr12:120126474-120236064 (-)
A/J	MGP_AJ_G0003140	antisense lncRNA gene	Chr12:115720317-115824257 (-)
AKR/J	MGP_AKRJ_G0003121	antisense lncRNA gene	Chr12:119219826-119335245 (-)
BALB/cJ	MGP_BALBcJ_G0003128	antisense lncRNA gene	Chr12:116139985-116242119 (-)
C3H/HeJ	MGP_C3HHeJ_G0003084	antisense lncRNA gene	Chr12:119510033-119619324 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003271	antisense lncRNA gene	Chr12:123899987-124012950 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002804	antisense lncRNA gene	Chr12:112114223-112217512 (-)
CAST/EiJ	MGP_CASTEiJ_G0003052	antisense lncRNA gene	Chr12:113358196-113470304 (-)
CBA/J	MGP_CBAJ_G0003080	antisense lncRNA gene	Chr12:128793257-128906773 (-)
DBA/2J	MGP_DBA2J_G0003086	antisense lncRNA gene	Chr12:115112008-115216468 (-)
FVB/NJ	MGP_FVBNJ_G0003105	antisense lncRNA gene	Chr12:113789930-113891971 (-)
LP/J	MGP_LPJ_G0003161	antisense lncRNA gene	Chr12:120165948-120281148 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003094	antisense lncRNA gene	Chr12:132091068-132193362 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003274	antisense lncRNA gene	Chr12:118399141-118505989 (-)
PWK/PhJ	MGP_PWKPhJ_G0003010	antisense lncRNA gene	Chr12:109854136-109959015 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002955	antisense lncRNA gene	Chr12:111345184-111464263 (-)
WSB/EiJ	MGP_WSBEiJ_G0003084	antisense lncRNA gene	Chr12:119353349-119463715 (-)

Homology

• Gene Tree
  Gm5441
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000101930 (Evidence)
• NCBI Gene
  432713

Representative Sequences			Length	Strain/Species
genomic	432713	NCBI Gene Model | MGI Sequence Detail	102492	C57BL/6J
transcript	NR_044987	RefSeq | MGI Sequence Detail	449	ZRU/MplStud

Molecular
Reagents

• All nucleic 5

  cDNA 5

References

• Summaries
  All 8
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;