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Gm5597 Pseudogene Detail
Summary
  • Symbol
    Gm5597
  • Name
    predicted gene 5597
  • Feature Type
    pseudogene
  • IDs
    MGI:3779502
    NCBI Gene: 434200
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:75894494-75895686 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 43.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779502
 pseudogene Chr7:75894297-75895867 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011045
 pseudogene Chr13:80774912-80776075 (-)
A/J MGP_AJ_G0011047
 pseudogene Chr13:77979624-77980782 (-)
AKR/J MGP_AKRJ_G0011002
 pseudogene Chr13:80317291-80318449 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0010921
 pseudogene Chr13:80016656-80017819 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0010742
 pseudogene Chr13:79140863-79142036 (-)
CBA/J MGP_CBAJ_G0010893
 pseudogene Chr13:86642470-86643633 (-)
DBA/2J MGP_DBA2J_G0010937
 pseudogene Chr13:77650206-77651369 (-)
FVB/NJ MGP_FVBNJ_G0010948
 pseudogene Chr13:76750248-76751406 (-)
LP/J MGP_LPJ_G0011026
 pseudogene Chr13:81012125-81013283 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010933
 pseudogene Chr13:85352318-85353481 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010715
 pseudogene Chr10:40160083-40161526 (-)
PWK/PhJ MGP_PWKPhJ_G0010618
 pseudogene Chr13:76537426-76538866 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0010792
 pseudogene Chr13:80136629-80137782 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Gm5597
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098009 Ensembl Gene Model | MGI Sequence Detail 1193 C57BL/6J ±  kb
transcript ENSMUST00000182353 Ensembl | MGI Sequence Detail 1193 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 15
    Phenotypes 11
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory