Gm6584 Pseudogene Detail

Summary

• Symbol
  Gm6584
• Name
  predicted gene 6584

• Feature Type
  pseudogene
• IDs
  MGI:3779611
  NCBI Gene: 625436
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:130375235-130384898 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 63.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779611	pseudogene	Chr6:130375175-130386280 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040478	pseudogene	Chr6:134187169-134196816 (-)
A/J	MGP_AJ_G0040462	pseudogene	Chr6:128997811-129007774 (-)
AKR/J	MGP_AKRJ_G0040389	pseudogene	Chr6:132560805-132570433 (-)
BALB/cJ	MGP_BALBcJ_G0040468	pseudogene	Chr6:128681207-128690835 (-)
C3H/HeJ	MGP_C3HHeJ_G0040088	pseudogene	Chr6:132769835-132781326 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041085	pseudogene	Chr6:137818509-137828205 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039151	pseudogene	Chr6:132757175-132768813 (-)
CBA/J	MGP_CBAJ_G0040061	pseudogene	Chr6:143085967-143095595 (-)
DBA/2J	MGP_DBA2J_G0040261	pseudogene	Chr6:127893537-127903464 (-)
FVB/NJ	MGP_FVBNJ_G0040209	pseudogene	Chr6:126873924-126883567 (-)
LP/J	MGP_LPJ_G0040303	pseudogene	Chr6:134421743-134431371 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040202	pseudogene	Chr6:147004969-147016289 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041162	pseudogene	Chr6:132670445-132680067 (-)
PWK/PhJ	MGP_PWKPhJ_G0038832	pseudogene	Chr6:126067495-126078146 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038543	pseudogene	Chr6:130785885-130799101 (-)
WSB/EiJ	MGP_WSBEiJ_G0039394	pseudogene	Chr6:133140739-133150345 (-)

Homology

• Gene Tree
  Gm6584
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084204 (Evidence)
• NCBI Gene
  625436

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084204	Ensembl Gene Model | MGI Sequence Detail	9664	C57BL/6J
transcript	ENSMUST00000119671	Ensembl | MGI Sequence Detail	447	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;