Gm6649 Pseudogene Detail

Summary

• Symbol
  Gm6649
• Name
  predicted gene 6649

• Feature Type
  pseudogene
• IDs
  MGI:3779621
  NCBI Gene: 626061
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:115736752-115737913 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 50.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779621	pseudogene	Chr3:115736746-115737913 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012371	pseudogene	Chr3:117811034-117812170 (+)
A/J	MGP_AJ_G0012366	pseudogene	Chr3:113953141-113954305 (+)
AKR/J	MGP_AKRJ_G0012331	pseudogene	Chr3:116822831-116823995 (+)
BALB/cJ	MGP_BALBcJ_G0012349	pseudogene	Chr3:113805734-113806898 (+)
C3H/HeJ	MGP_C3HHeJ_G0012211	pseudogene	Chr3:117198792-117199956 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012662	pseudogene	Chr3:122145860-122147024 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011031	pseudogene	Chr3:109652168-109653279 (+)
CAST/EiJ	MGP_CASTEiJ_G0011978	pseudogene	Chr3:116469968-116471104 (+)
CBA/J	MGP_CBAJ_G0012190	pseudogene	Chr3:126305009-126306173 (+)
DBA/2J	MGP_DBA2J_G0012247	pseudogene	Chr3:113191939-113193103 (+)
FVB/NJ	MGP_FVBNJ_G0012250	pseudogene	Chr3:110838203-110839367 (+)
LP/J	MGP_LPJ_G0012317	pseudogene	Chr3:119351356-119352492 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012253	pseudogene	Chr3:133687012-133688176 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012666	pseudogene	Chr3:116379534-116380698 (+)
PWK/PhJ	MGP_PWKPhJ_G0011820	pseudogene	Chr3:112829777-112830905 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011637	pseudogene	Chr3:114391718-114392882 (+)
WSB/EiJ	MGP_WSBEiJ_G0012010	pseudogene	Chr3:117056870-117058034 (+)

Homology

• Gene Tree
  Gm6649
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm6649
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000105645 (Evidence)
• NCBI Gene
  626061

Representative Sequences			Length	Strain/Species
genomic	626061	NCBI Gene Model | MGI Sequence Detail	1162	C57BL/6J
transcript	AI563638	GenBank | ENA | DDBJ | MGI Sequence Detail	181	Not Specified

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426