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Cldn34a Gene Detail
Summary
  • Symbol
    Cldn34a
  • Name
    claudin 34A
  • Synonyms
    Gm7157
  • Feature Type
    protein coding gene
  • IDs
    MGI:3779684
    NCBI Gene: 635396
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:151320524-151347194 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 68.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    655 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779684
 protein coding gene ChrX:151320497-151347194 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036187
 protein coding gene ChrX:150356414-150357049 (+)
A/J MGP_AJ_G0036163
 protein coding gene ChrX:149539203-149539838 (+)
AKR/J MGP_AKRJ_G0036089
 protein coding gene ChrX:154348424-154349059 (+)
BALB/cJ MGP_BALBcJ_G0036154
 protein coding gene ChrX:147719501-147720136 (+)
C3H/HeJ MGP_C3HHeJ_G0035862
 protein coding gene ChrX:150569665-150570300 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036679
 protein coding gene ChrX:154645504-154646139 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033503
 protein coding gene ChrX:141205667-141206302 (+)
CAST/EiJ MGP_CASTEiJ_G0035153
 protein coding gene ChrX:129938804-129939439 (+)
CBA/J MGP_CBAJ_G0035839
 protein coding gene ChrX:159190838-159191473 (+)
DBA/2J MGP_DBA2J_G0035997
 protein coding gene ChrX:148564753-148565388 (+)
FVB/NJ MGP_FVBNJ_G0035931
 protein coding gene ChrX:147716330-147716965 (+)
LP/J MGP_LPJ_G0036088
 protein coding gene ChrX:151430055-151430690 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035967
 protein coding gene ChrX:167359626-167360261 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036714
 protein coding gene ChrX:149873143-149873778 (+)
PWK/PhJ MGP_PWKPhJ_G0034847
 protein coding gene ChrX:126865645-126866280 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034673
 protein coding gene ChrX:130385083-130385718 (+)
WSB/EiJ MGP_WSBEiJ_G0035288
 protein coding gene ChrX:147921876-147922511 (+)



Homology
more
  • Human Ortholog
    CLDN34, claudin 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 635396 NCBI Gene Model | MGI Sequence Detail 26671 C57BL/6J ±  kb
transcript NM_001199311 RefSeq | MGI Sequence Detail 636 mixed  
polypeptide NP_001186240 RefSeq | MGI Sequence Detail 211 mixed  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006187 Claudin
References
more
  • Summaries
    All 8
    Gene Ontology 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:161428 Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas, Annotation inferences using phylogenetic trees. 2010;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory