Gm9560 Pseudogene Detail

Summary

• Symbol
  Gm9560
• Name
  predicted gene 9560

• Feature Type
  pseudogene
• IDs
  MGI:3779970
  NCBI Gene: 672405
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:129975911-129985843 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 77.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  347 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779970	pseudogene	Chr10:129975911-129985846 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010555	pseudogene	Chr10:134087460-134097542 (+)
A/J	MGP_AJ_G0010548	pseudogene	Chr10:128668234-128670619 (+)
AKR/J	MGP_AKRJ_G0010508	pseudogene	Chr10:132434180-132446080 (+)
BALB/cJ	MGP_BALBcJ_G0010522	pseudogene	Chr10:129089954-129102430 (+)
C3H/HeJ	MGP_C3HHeJ_G0010446	pseudogene	Chr10:132616965-132628490 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010790	pseudogene	Chr10:138630053-138639825 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009468	pseudogene	Chr10:122426819-122428101 (+)
CAST/EiJ	MGP_CASTEiJ_G0010272	pseudogene	Chr10:133337776-133342788 (+)
CBA/J	MGP_CBAJ_G0010417	pseudogene	Chr10:144273768-144309918 (+)
DBA/2J	MGP_DBA2J_G0010447	pseudogene	Chr10:127770599-127779051 (+)
FVB/NJ	MGP_FVBNJ_G0010465	pseudogene	Chr10:126658664-126668665 (+)
LP/J	MGP_LPJ_G0010536	pseudogene	Chr10:134652657-134660916 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010441	pseudogene	Chr10:146883078-146891664 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010770	pseudogene	Chr10:132504224-132514159 (+)
PWK/PhJ	MGP_PWKPhJ_G0010172	pseudogene	Chr10:127906073-127919811 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009985	pseudogene	Chr10:131547953-131556252 (+)
WSB/EiJ	MGP_WSBEiJ_G0010333	pseudogene	Chr10:132768197-132776287 (+)

Homology

• Gene Tree
  Gm9560
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108134 (Evidence)
• NCBI Gene
  672405

Representative Sequences			Length	Strain/Species
genomic	672405	NCBI Gene Model | MGI Sequence Detail	9933	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;