Gm9575 Pseudogene Detail

Summary

• Symbol
  Gm9575
• Name
  predicted gene 9575

• Feature Type
  pseudogene
• IDs
  MGI:3779984
  NCBI Gene: 672778
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:50485371-50486709 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 31.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779984	pseudogene	Chr16:50485183-50486716 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011293	pseudogene	Chr16:49591677-49593015 (-)
A/J	MGP_AJ_G0011278	pseudogene	Chr16:47419780-47421118 (-)
AKR/J	MGP_AKRJ_G0011239	pseudogene	Chr16:49003200-49005276 (-)
BALB/cJ	MGP_BALBcJ_G0011252	pseudogene	Chr16:47498441-47500090 (-)
C3H/HeJ	MGP_C3HHeJ_G0011144	pseudogene	Chr16:49064403-49065713 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011538	pseudogene	Chr16:50858470-50860672 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010119	pseudogene	Chr16:47471746-47473104 (-)
CAST/EiJ	MGP_CASTEiJ_G0010967	pseudogene	Chr16:49417548-49418864 (-)
CBA/J	MGP_CBAJ_G0011122	pseudogene	Chr16:52875284-52876622 (-)
DBA/2J	MGP_DBA2J_G0011170	pseudogene	Chr16:47154033-47155371 (-)
FVB/NJ	MGP_FVBNJ_G0011173	pseudogene	Chr16:47019062-47020400 (-)
LP/J	MGP_LPJ_G0011264	pseudogene	Chr16:49379367-49383473 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011169	pseudogene	Chr16:52608275-52609613 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011521	pseudogene	Chr16:49052325-49053663 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9575
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000083692 (Evidence)
• NCBI Gene
  672778

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083692	Ensembl Gene Model | MGI Sequence Detail	1339	C57BL/6J
transcript	ENSMUST00000122140	Ensembl | MGI Sequence Detail	1339	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;