Gm9645 Pseudogene Detail

Summary

• Symbol
  Gm9645
• Name
  predicted gene 9645

• Feature Type
  pseudogene
• IDs
  MGI:3780052
  NCBI Gene: 675537
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:57673285-57674076 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 28.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780052	pseudogene	Chr3:57673243-57674095 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012160	pseudogene	Chr3:56559008-56559799 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0012119	pseudogene	Chr3:55946338-55948215 (-)
BALB/cJ	MGP_BALBcJ_G0012133	pseudogene	Chr3:54635764-54636555 (-)
C3H/HeJ	MGP_C3HHeJ_G0012009	pseudogene	Chr3:56152466-56153257 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012443	pseudogene	Chr3:58662256-58662958 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0012039	pseudogene	Chr3:54320248-54321922 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0012107	pseudogene	Chr3:57301484-57303301 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0012451	pseudogene	Chr3:55892455-55893246 (-)
PWK/PhJ	MGP_PWKPhJ_G0011630	pseudogene	Chr3:53962553-53963424 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011445	pseudogene	Chr3:55565983-55566774 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9645
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm9645
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  1

• Ensembl
  ENSMUSG00000106421 (Evidence)
• NCBI Gene
  675537

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106421	Ensembl Gene Model | MGI Sequence Detail	792	C57BL/6J
transcript	ENSMUST00000197131	Ensembl | MGI Sequence Detail	792	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426