Gm2021 Pseudogene Detail

Summary

• Symbol
  Gm2021
• Name
  predicted gene 2021

• Feature Type
  pseudogene
• IDs
  MGI:3780190
  NCBI Gene: 108167481
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:39311970-39312433 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 25.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780190	pseudogene	Chr7:39311796-39315646 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013874	pseudogene	Chr7:39288826-39289289 (-)
A/J	MGP_AJ_G0013891	pseudogene	Chr7:38371281-38371744 (-)
AKR/J	MGP_AKRJ_G0013827	pseudogene	Chr7:39506898-39507361 (-)
BALB/cJ	MGP_BALBcJ_G0013855	pseudogene	Chr7:38610647-38611110 (-)
C3H/HeJ	MGP_C3HHeJ_G0013684	pseudogene	Chr7:40135639-40136102 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014272	pseudogene	Chr7:41228084-41228547 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012148	pseudogene	Chr7:38911978-38912439 (-)
CAST/EiJ	MGP_CASTEiJ_G0013353	pseudogene	Chr7:31253530-31253993 (-)
CBA/J	MGP_CBAJ_G0013662	pseudogene	Chr7:42538579-42539042 (-)
DBA/2J	MGP_DBA2J_G0013747	pseudogene	Chr7:38297981-38298444 (-)
FVB/NJ	MGP_FVBNJ_G0013737	pseudogene	Chr7:38056974-38057437 (-)
LP/J	MGP_LPJ_G0013819	pseudogene	Chr7:39682838-39683301 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013763	pseudogene	Chr7:41339579-41340042 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014239	pseudogene	Chr7:38851410-38851873 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0012935	pseudogene	Chr7:27582736-27583199 (-)
WSB/EiJ	MGP_WSBEiJ_G0013409	pseudogene	Chr7:39282818-39283281 (-)

Homology

• Gene Tree
  Gm2021
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100912 (Evidence)
• NCBI Gene
  108167481

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100912	Ensembl Gene Model | MGI Sequence Detail	464	C57BL/6J
transcript	ENSMUST00000190623	Ensembl | MGI Sequence Detail	464	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;