Gm2077 Pseudogene Detail

Summary

• Symbol
  Gm2077
• Name
  predicted gene 2077

• Feature Type
  pseudogene
• IDs
  MGI:3780244
  NCBI Gene: 100039167
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:4004204-4004522 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 1.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780244	pseudogene	Chr3:4004203-4004588 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011998	pseudogene	Chr3:678246-678564 (+)
A/J	MGP_AJ_G0011989	pseudogene	Chr3:1032944-1033262 (+)
AKR/J	MGP_AKRJ_G0011948	pseudogene	Chr3:812189-812507 (+)
BALB/cJ	MGP_BALBcJ_G0011967	pseudogene	Chr3:761511-761829 (+)
C3H/HeJ	MGP_C3HHeJ_G0011844	pseudogene	Chr3:1042027-1042345 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012265	pseudogene	Chr3:1071398-1071716 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010718	pseudogene	Chr3:505552-505864 (+)
CAST/EiJ	MGP_CASTEiJ_G0011626	pseudogene	Chr3:1094600-1094918 (+)
CBA/J	MGP_CBAJ_G0011817	pseudogene	Chr3:729434-729752 (+)
DBA/2J	MGP_DBA2J_G0011871	pseudogene	Chr3:668417-668735 (+)
FVB/NJ	MGP_FVBNJ_G0011879	pseudogene	Chr3:658115-658433 (+)
LP/J	MGP_LPJ_G0011940	pseudogene	Chr3:1022374-1022692 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011879	pseudogene	Chr3:1091476-1091794 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012270	pseudogene	Chr3:657644-657962 (+)
PWK/PhJ	MGP_PWKPhJ_G0011475	pseudogene	Chr3:995370-995688 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011291	pseudogene	Chr3:888487-888805 (+)
WSB/EiJ	MGP_WSBEiJ_G0011648	pseudogene	Chr3:664874-665192 (+)

Homology

• Gene Tree
  Gm2077
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000103224 (Evidence)
• NCBI Gene
  100039167

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103224	Ensembl Gene Model | MGI Sequence Detail	319	C57BL/6J
transcript	ENSMUST00000195017	Ensembl | MGI Sequence Detail	319	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14