Gm2189 Pseudogene Detail

Summary

• Symbol
  Gm2189
• Name
  predicted gene 2189

• Feature Type
  pseudogene
• IDs
  MGI:3780359
  NCBI Gene: 100039370
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:36616773-36617201 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 15.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780359	pseudogene	Chr6:36616746-36617201 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013407	pseudogene	Chr6:34799605-34800032 (-)
A/J	MGP_AJ_G0013391	pseudogene	Chr6:33316297-33316724 (-)
AKR/J	MGP_AKRJ_G0013354	pseudogene	Chr6:34388201-34388628 (-)
BALB/cJ	MGP_BALBcJ_G0013369	pseudogene	Chr6:33508041-33508468 (-)
C3H/HeJ	MGP_C3HHeJ_G0013220	pseudogene	Chr6:34396159-34396587 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013751	pseudogene	Chr6:35687781-35688209 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011855	pseudogene	Chr6:31265384-31265815 (-)
CAST/EiJ	MGP_CASTEiJ_G0012931	pseudogene	Chr6:34210244-34210671 (-)
CBA/J	MGP_CBAJ_G0013187	pseudogene	Chr6:37075763-37076191 (-)
DBA/2J	MGP_DBA2J_G0013271	pseudogene	Chr6:33161346-33161773 (-)
FVB/NJ	MGP_FVBNJ_G0013268	pseudogene	Chr6:32953583-32954010 (-)
LP/J	MGP_LPJ_G0013338	pseudogene	Chr6:34913919-34914346 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013285	pseudogene	Chr6:39455516-39455943 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013746	pseudogene	Chr6:34292336-34292764 (-)
PWK/PhJ	MGP_PWKPhJ_G0012743	pseudogene	Chr6:32763016-32763444 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012523	pseudogene	Chr6:33968630-33969057 (-)
WSB/EiJ	MGP_WSBEiJ_G0012971	pseudogene	Chr6:34233515-34233943 (-)

Homology

• Gene Tree
  Gm2189
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106872 (Evidence)
• NCBI Gene
  100039370

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106872	Ensembl Gene Model | MGI Sequence Detail	429	C57BL/6J
transcript	ENSMUST00000201419	Ensembl | MGI Sequence Detail	429	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;