Gm2223 Pseudogene Detail

Summary

• Symbol
  Gm2223
• Name
  predicted pseudogene 2223

• Feature Type
  pseudogene
• IDs
  MGI:3780393
  NCBI Gene: 100039419
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:32943124-32944473 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 19.84 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780393	pseudogene	ChrX:32943123-32946622 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011199	pseudogene	Chr15:76019548-76020823 (-)
A/J	MGP_AJ_G0011188	pseudogene	Chr15:73248521-73249796 (-)
AKR/J	MGP_AKRJ_G0011149	pseudogene	Chr15:75231861-75233136 (-)
BALB/cJ	MGP_BALBcJ_G0011157	pseudogene	Chr15:73269046-73270321 (-)
C3H/HeJ	MGP_C3HHeJ_G0011056	pseudogene	Chr15:75287837-75289112 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011453	pseudogene	Chr15:78855436-78856711 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010035	pseudogene	Chr15:69920495-69921826 (-)
CAST/EiJ	MGP_CASTEiJ_G0010879	pseudogene	Chr15:76074209-76075484 (-)
CBA/J	MGP_CBAJ_G0011036	pseudogene	Chr15:81367207-81368482 (-)
DBA/2J	MGP_DBA2J_G0011084	pseudogene	Chr15:72780294-72781569 (-)
FVB/NJ	MGP_FVBNJ_G0011085	pseudogene	Chr15:71829513-71830788 (-)
LP/J	MGP_LPJ_G0011174	pseudogene	Chr15:76096192-76097467 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011080	pseudogene	Chr15:86671869-86673145 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011430	pseudogene	Chr15:75479601-75480876 (-)
PWK/PhJ	MGP_PWKPhJ_G0010752	pseudogene	Chr15:72922892-72924291 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010572	pseudogene	Chr15:75191358-75192637 (-)
WSB/EiJ	MGP_WSBEiJ_G0010926	pseudogene	Chr15:75559665-75560941 (-)

Homology

• Gene Tree
  Gm2223
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000079297 (Evidence)
• NCBI Gene
  100039419

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000079297	Ensembl Gene Model | MGI Sequence Detail	1350	C57BL/6J
transcript	ENSMUST00000112099	Ensembl | MGI Sequence Detail	1350	Not Applicable

Other
Accession IDs

MGI:3779318

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;