Gm2345 Pseudogene Detail

Summary

• Symbol
  Gm2345
• Name
  predicted gene 2345

• Feature Type
  pseudogene
• IDs
  MGI:3780515
  NCBI Gene: 100039628
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:50209304-50209892 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 21.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780515	pseudogene	Chr3:50209304-50209892 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012139	pseudogene	Chr3:48722782-48723370 (+)
A/J	MGP_AJ_G0012134	pseudogene	Chr3:47316722-47317310 (+)
AKR/J	MGP_AKRJ_G0012097	pseudogene	Chr3:48259614-48260202 (+)
BALB/cJ	MGP_BALBcJ_G0012111	pseudogene	Chr3:47188602-47189190 (+)
C3H/HeJ	MGP_C3HHeJ_G0011987	pseudogene	Chr3:48462484-48463072 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012420	pseudogene	Chr3:50688251-50688839 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011962	pseudogene	Chr3:52291266-52291854 (+)
DBA/2J	MGP_DBA2J_G0012017	pseudogene	Chr3:46941616-46942204 (+)
FVB/NJ	MGP_FVBNJ_G0012023	pseudogene	Chr3:45931686-45932274 (+)
LP/J	MGP_LPJ_G0012087	pseudogene	Chr3:49469936-49470524 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012026	pseudogene	Chr3:56516252-56516840 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012429	pseudogene	Chr3:48175572-48176160 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm2345
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm2345
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000102167 (Evidence)
• NCBI Gene
  100039628

Representative Sequences			Length	Strain/Species
genomic	100039628	NCBI Gene Model | MGI Sequence Detail	589	C57BL/6J

References

• Summaries
  All 11

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426