Gm2429 Pseudogene Detail

Summary

• Symbol
  Gm2429
• Name
  predicted gene 2429

• Feature Type
  pseudogene
• IDs
  MGI:3780596
  NCBI Gene: 100039798
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:12696320-12696905 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 3.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780596	pseudogene	Chr3:12696318-12697085 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012029	pseudogene	Chr3:9664277-9664853 (+)
A/J	MGP_AJ_G0012020	pseudogene	Chr3:9748754-9749339 (+)
AKR/J	MGP_AKRJ_G0011981	pseudogene	Chr3:9665967-9666543 (+)
BALB/cJ	MGP_BALBcJ_G0011997	pseudogene	Chr3:9439184-9439769 (+)
C3H/HeJ	MGP_C3HHeJ_G0011875	pseudogene	Chr3:9967468-9968053 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012302	pseudogene	Chr3:10402403-10402988 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010743	pseudogene	Chr3:8318985-8319563 (+)
CAST/EiJ	MGP_CASTEiJ_G0011657	pseudogene	Chr3:10029491-10030075 (+)
CBA/J	MGP_CBAJ_G0011848	pseudogene	Chr3:10524245-10524830 (+)
DBA/2J	MGP_DBA2J_G0011900	pseudogene	Chr3:9323169-9323745 (+)
FVB/NJ	MGP_FVBNJ_G0011910	pseudogene	Chr3:9174296-9174881 (+)
LP/J	MGP_LPJ_G0011977	pseudogene	Chr3:10201619-10202195 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011911	pseudogene	Chr3:11877203-11877788 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012309	pseudogene	Chr3:9519365-9519949 (+)
PWK/PhJ	MGP_PWKPhJ_G0011505	pseudogene	Chr3:9469042-9469627 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011320	pseudogene	Chr3:9577348-9577928 (+)
WSB/EiJ	MGP_WSBEiJ_G0011679	pseudogene	Chr3:9538136-9538712 (+)

Homology

• Gene Tree
  Gm2429
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000104177 (Evidence)
• NCBI Gene
  100039798

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104177	Ensembl Gene Model | MGI Sequence Detail	586	C57BL/6J
transcript	ENSMUST00000194635	Ensembl | MGI Sequence Detail	586	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;