Gm2467 Pseudogene Detail

Summary

• Symbol
  Gm2467
• Name
  predicted gene 2467

• Feature Type
  pseudogene
• IDs
  MGI:3780634
  NCBI Gene: 100039870
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:21165118-21166127 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 9.75 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780634	pseudogene	Chr10:21165100-21166332 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010498	pseudogene	Chr10:19085131-19086140 (+)
A/J	MGP_AJ_G0010488	pseudogene	Chr10:18349460-18350469 (+)
AKR/J	MGP_AKRJ_G0010454	pseudogene	Chr10:18680710-18681663 (+)
BALB/cJ	MGP_BALBcJ_G0010461	pseudogene	Chr10:18412042-18413051 (+)
C3H/HeJ	MGP_C3HHeJ_G0010393	pseudogene	Chr10:19005775-19006784 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010210	pseudogene	Chr10:18926099-18927560 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0010390	pseudogene	Chr10:18230766-18231775 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0010480	pseudogene	Chr10:18879230-18881274 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010379	pseudogene	Chr10:20666007-20667016 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010704	pseudogene	Chr10:18667458-18669378 (+)
PWK/PhJ	MGP_PWKPhJ_G0010112	pseudogene	Chr10:18127144-18128059 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009927	pseudogene	Chr10:18836958-18838923 (+)
WSB/EiJ	MGP_WSBEiJ_G0010281	pseudogene	Chr10:18762497-18763506 (+)

Homology

• Gene Tree
  Gm2467
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm2467
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000098102 (Evidence)
• NCBI Gene
  100039870

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098102	Ensembl Gene Model | MGI Sequence Detail	1010	C57BL/6J
transcript	ENSMUST00000182266	Ensembl | MGI Sequence Detail	1010	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm2467:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92627	Chr10:21165042-21165047 (+)	-73 bp