Gm2830 Pseudogene Detail

Summary

• Symbol
  Gm2830
• Name
  predicted gene 2830
• Synonyms
  Gm16247

• Feature Type
  pseudogene
• IDs
  MGI:3781002
  NCBI Gene: 100040543
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:54647518-54647902 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 28.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781002	pseudogene	Chr13:54647391-54647902 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011021	pseudogene	Chr13:53901082-53901466 (-)
A/J	MGP_AJ_G0011025	pseudogene	Chr13:51926776-51927160 (-)
AKR/J	MGP_AKRJ_G0010977	pseudogene	Chr13:53453530-53453914 (-)
BALB/cJ	MGP_BALBcJ_G0010998	pseudogene	Chr13:52155159-52155543 (-)
C3H/HeJ	MGP_C3HHeJ_G0010897	pseudogene	Chr13:53273603-53273987 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011279	pseudogene	Chr13:55551433-55551817 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011061	pseudogene	Chr17:73414443-73414949 (+)
CBA/J	MGP_CBAJ_G0010869	pseudogene	Chr13:57658215-57658599 (-)
DBA/2J	MGP_DBA2J_G0010915	pseudogene	Chr13:51493135-51493519 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0011004	pseudogene	Chr13:54173406-54173790 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010912	pseudogene	Chr13:57157575-57157959 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011258	pseudogene	Chr13:53042493-53042877 (-)
PWK/PhJ	MGP_PWKPhJ_G0010927	pseudogene	Chr17:69046409-69052569 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm2830
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm2830
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000086567 (Evidence)
• NCBI Gene
  100040543

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086567	Ensembl Gene Model | MGI Sequence Detail	385	C57BL/6J
transcript	ENSMUST00000140330	Ensembl | MGI Sequence Detail	385	Not Applicable

Other
Accession IDs

MGI:3826583

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69